Sphingomonas sp. SCN 67-18 ABS87_C0079

Rod

Kingdom

Pseudomonadati

Phylum

Pseudomonadota

Class

Alphaproteobacteria

Order

Sphingomonadales

Family

Sphingomonadaceae

Genus

Sphingomonas

Description

Sphingomonas sp. SCN 67-18 ABS87_C0079 is characterized as a rod-shaped bacterium that possesses flagella, indicating its capability for motility. The organism has a single replicon, which suggests a streamlined genetic structure that may facilitate efficient replication and adaptation to its environment. The bacterium is cataloged under the accession MEFG00000000.1, providing a reference point for further genetic and genomic studies. The presence of a single replicon may also imply a relatively simple genomic architecture, which could be advantageous in fluctuating environments where rapid responses to changes are necessary. From a biological and ecological perspective, the motility granted by flagella could play a significant role in the bacterium’s survival and ecological interactions. This trait may allow Sphingomonas sp. SCN 67-18 ABS87_C0079 to navigate toward nutrient-rich environments or evade harmful conditions, thereby influencing its distribution and ecological niche. Understanding the characteristics of this bacterium can shed light on its role in microbial communities, particularly in environments where motility and adaptability are crucial for survival.

Taxonomy

KingdomPseudomonadati
PhylumPseudomonadota
ClassAlphaproteobacteria
OrderSphingomonadales
FamilySphingomonadaceae
GenusSphingomonas
SpeciesSphingomonas sp. SCN 67-18
StrainABS87_C0079

Profile

Physiology
Gram staining propertiesNot Available
ShapeRod
MobilityNot Available
Flagellar presenceYes
Number of membranesNot Available
Image of Sphingomonas sp. SCN 67-18 ABS87_C0079
Image source: Wikipedia/Wikimedia
Ecology, Host, and Life Cycle
Oxygen requirementsNot Available
Optimal temperatureNot Available
Temperature rangeNot Available
HabitatNot Available
Biotic relationshipNot Available
Host(s)Not Available
Cell arrangementNot Available
SporulationNot Available
Energy sourceNot Available
PathogenicityNot Available

Genome Summary

MAG: Sphingomonas sp. SCN 67-18 ABS87_C0079, whole genome shotgun

Gene Summary

Adenine Count

537389 bp

Thymine Count

532836 bp

Guanine Count

1065637 bp

Cytosine Count

1084722 bp

Genome Length

3220613 bp

Protein-coding Genes

2952 genes

Non-Coding Genes

48 genes

# of Chromosomes/Plasmids

1

Genes

NameLocus TagUniProt IDStrand OrientationGene Start/EndProtein Molecular Weight
s-methyl-5-thioribose-1-phosphate isomeraseABS87_08400Not AvailablePositive1770930 - 177197036849.2
rnd transporterABS87_08405Not AvailableNegative1772067 - 177312537876.0
multidrug efflux rnd transporter permeaseABS87_08410Not AvailableNegative1773460 - 1776621113594.0
efflux transporter periplasmic adaptor subunitABS87_08415Not AvailableNegative1776625 - 177779740966.3
hypothetical proteinABS87_08420Not AvailablePositive1777930 - 177855623624.1
ribosome-binding factor aABS87_08425Not AvailableNegative1778626 - 177901814532.6
translation initiation factor if-2ABS87_08430Not AvailableNegative1779030 - 178158290717.1
transcription terminating nucleic-acid-binding proteinABS87_08435Not AvailableNegative1781600 - 178230124614.2
transcription termination/antitermination protein nusaABS87_08440Not AvailableNegative1782288 - 178389859135.9
ribosome maturation factorABS87_08445Not AvailableNegative1783909 - 178443318566.2

Displaying genes 1651 – 1660 of 3000 in total

Pathways

0 pathways

No pathways found

No metabolic pathways have been associated with this bacterium yet.

Metabolites

0 records
Metabolite IDMetabolite nameStructureCAS number
No metabolites foundTry different search terms or mass values.

Displaying 0 metabolites

Health Effects

No health effects information available for this bacterium.