Hymenobacter coccineus strain CCM 8649

rod

Kingdom

Pseudomonadati

Phylum

Bacteroidota

Class

Cytophagia

Order

Cytophagales

Family

Hymenobacteraceae

Genus

Hymenobacter

Description

Hymenobacter coccineus strain CCM 8649 is characterized as a Gram-negative bacterium with a rod-shaped morphology. This strain is notable for having a single replicon, which is significant in terms of its genomic organization and potential replication mechanisms. The strain is cataloged under the accession number MDZA00000000.1, pointing to its inclusion in genomic databases for further study and reference. The Gram-negative classification of Hymenobacter coccineus indicates the presence of a thin peptidoglycan layer surrounded by an outer membrane, which can influence its interaction with the environment, including susceptibility to antibiotics and the ability to form biofilms. The rod shape is a common morphological characteristic among many bacterial species, which can affect their motility and ecological niches. From an ecological perspective, the traits of Hymenobacter coccineus suggest it may contribute to various biological processes in its environment, such as nutrient cycling or bioremediation. Its Gram-negative nature and single replicon status may allow it to adapt efficiently to diverse habitats, potentially playing a role in soil microbiomes or other ecosystems where microbial diversity is crucial for maintaining environmental health. Further research into this strain could provide insights into its ecological functions and applications in biotechnology.

Taxonomy

KingdomPseudomonadati
PhylumBacteroidota
ClassCytophagia
OrderCytophagales
FamilyHymenobacteraceae
GenusHymenobacter
SpeciesHymenobacter coccineus
Strainstrain CCM 8649

Profile

Physiology
Gram staining propertiesGram-negative
Shaperod
MobilityNot Available
Flagellar presenceNot Available
Number of membranesNot Available
Ecology, Host, and Life Cycle
Oxygen requirementsNot Available
Optimal temperatureNot Available
Temperature rangeNot Available
HabitatNot Available
Biotic relationshipNot Available
Host(s)Not Available
Cell arrangementNot Available
SporulationNot Available
Energy sourceNot Available
PathogenicityNot Available

Genome Summary

Hymenobacter coccineus strain CCM 8649

Gene Summary

Adenine Count

Not Available

Thymine Count

Not Available

Guanine Count

Not Available

Cytosine Count

Not Available

Genome Length

Not Available

Protein-coding Genes

2223 genes

Non-Coding Genes

16 genes

# of Chromosomes/Plasmids

1

Genes

NameLocus TagUniProt IDStrand OrientationGene Start/EndProtein Molecular Weight
hypothetical proteinBEN49_11920Not AvailablePositive4302232 - 430279221400.8
aspartate kinaseBEN49_11925Not AvailablePositive4303042 - 430442450181.3
x-pro dipeptidyl-peptidaseBEN49_11930Not AvailablePositive4304521 - 430648873646.9
glucose-6-phosphate dehydrogenaseBEN49_11940Not AvailablePositive4308199 - 430971357277.4
6-phosphogluconolactonaseBEN49_11945Not AvailablePositive4309717 - 431043925538.4
ribose 5-phosphate isomerase aBEN49_11950Not AvailableNegative4310549 - 431131326474.3
hypothetical proteinBEN49_11955Not AvailableNegative4311548 - 431243231778.0
multidrug abc transporter atp-binding proteinBEN49_11960Not AvailableNegative4313185 - 431502967078.1
hypothetical proteinBEN49_11965Not AvailableNegative4315099 - 431553315304.7
sodium:solute symporterBEN49_11970Not AvailableNegative4315601 - 431710355352.6

Displaying genes 3411 – 3420 of 4504 in total

Pathways

0 pathways

No pathways found

No metabolic pathways have been associated with this bacterium yet.

Metabolites

0 records
Metabolite IDMetabolite nameStructureCAS number
No metabolites foundTry different search terms or mass values.

Displaying 0 metabolites

Health Effects

No health effects information available for this bacterium.