Hymenobacter coccineus strain CCM 8649

rod

Kingdom

Pseudomonadati

Phylum

Bacteroidota

Class

Cytophagia

Order

Cytophagales

Family

Hymenobacteraceae

Genus

Hymenobacter

Description

Hymenobacter coccineus strain CCM 8649 is characterized as a Gram-negative bacterium with a rod-shaped morphology. This strain is notable for having a single replicon, which is significant in terms of its genomic organization and potential replication mechanisms. The strain is cataloged under the accession number MDZA00000000.1, pointing to its inclusion in genomic databases for further study and reference. The Gram-negative classification of Hymenobacter coccineus indicates the presence of a thin peptidoglycan layer surrounded by an outer membrane, which can influence its interaction with the environment, including susceptibility to antibiotics and the ability to form biofilms. The rod shape is a common morphological characteristic among many bacterial species, which can affect their motility and ecological niches. From an ecological perspective, the traits of Hymenobacter coccineus suggest it may contribute to various biological processes in its environment, such as nutrient cycling or bioremediation. Its Gram-negative nature and single replicon status may allow it to adapt efficiently to diverse habitats, potentially playing a role in soil microbiomes or other ecosystems where microbial diversity is crucial for maintaining environmental health. Further research into this strain could provide insights into its ecological functions and applications in biotechnology.

Taxonomy

KingdomPseudomonadati
PhylumBacteroidota
ClassCytophagia
OrderCytophagales
FamilyHymenobacteraceae
GenusHymenobacter
SpeciesHymenobacter coccineus
Strainstrain CCM 8649

Profile

Physiology
Gram staining propertiesGram-negative
Shaperod
MobilityNot Available
Flagellar presenceNot Available
Number of membranesNot Available
Ecology, Host, and Life Cycle
Oxygen requirementsNot Available
Optimal temperatureNot Available
Temperature rangeNot Available
HabitatNot Available
Biotic relationshipNot Available
Host(s)Not Available
Cell arrangementNot Available
SporulationNot Available
Energy sourceNot Available
PathogenicityNot Available

Genome Summary

Hymenobacter coccineus strain CCM 8649

Gene Summary

Adenine Count

Not Available

Thymine Count

Not Available

Guanine Count

Not Available

Cytosine Count

Not Available

Genome Length

Not Available

Protein-coding Genes

2223 genes

Non-Coding Genes

16 genes

# of Chromosomes/Plasmids

1

Genes

NameLocus TagUniProt IDStrand OrientationGene Start/EndProtein Molecular Weight
two-component sensor histidine kinaseBEN49_11330Not AvailableNegative4156686 - 415779540826.0
dna-binding response regulatorBEN49_11335Not AvailableNegative4157904 - 415859925893.3
atp-dependent exodnase (exonuclease v) alpha subunit - helicase superfamily i memberBEN49_11340Not AvailableNegative4158700 - 415951230599.9
recombinase recaBEN49_11345Not AvailableNegative4159707 - 416073836670.4
hypothetical proteinBEN49_11350Not AvailablePositive4161134 - 416222541345.1
hypothetical proteinBEN49_11355Not AvailableNegative4162424 - 416299321057.3
hydroxyacid dehydrogenaseBEN49_11360Not AvailablePositive4163159 - 416422637955.6
hypothetical proteinBEN49_11365Not AvailableNegative4165192 - 416561115771.0
aaa family atpaseBEN49_11370Not AvailableNegative4165735 - 416668835054.3
peptidylprolyl isomeraseBEN49_11380Not AvailableNegative4168444 - 417084987982.0

Displaying genes 3301 – 3310 of 4504 in total

Pathways

0 pathways

No pathways found

No metabolic pathways have been associated with this bacterium yet.

Metabolites

0 records
Metabolite IDMetabolite nameStructureCAS number
No metabolites foundTry different search terms or mass values.

Displaying 0 metabolites

Health Effects

No health effects information available for this bacterium.