Hymenobacter coccineus strain CCM 8649

rod

Kingdom

Pseudomonadati

Phylum

Bacteroidota

Class

Cytophagia

Order

Cytophagales

Family

Hymenobacteraceae

Genus

Hymenobacter

Description

Hymenobacter coccineus strain CCM 8649 is characterized as a Gram-negative bacterium with a rod-shaped morphology. This strain is notable for having a single replicon, which is significant in terms of its genomic organization and potential replication mechanisms. The strain is cataloged under the accession number MDZA00000000.1, pointing to its inclusion in genomic databases for further study and reference. The Gram-negative classification of Hymenobacter coccineus indicates the presence of a thin peptidoglycan layer surrounded by an outer membrane, which can influence its interaction with the environment, including susceptibility to antibiotics and the ability to form biofilms. The rod shape is a common morphological characteristic among many bacterial species, which can affect their motility and ecological niches. From an ecological perspective, the traits of Hymenobacter coccineus suggest it may contribute to various biological processes in its environment, such as nutrient cycling or bioremediation. Its Gram-negative nature and single replicon status may allow it to adapt efficiently to diverse habitats, potentially playing a role in soil microbiomes or other ecosystems where microbial diversity is crucial for maintaining environmental health. Further research into this strain could provide insights into its ecological functions and applications in biotechnology.

Taxonomy

KingdomPseudomonadati
PhylumBacteroidota
ClassCytophagia
OrderCytophagales
FamilyHymenobacteraceae
GenusHymenobacter
SpeciesHymenobacter coccineus
Strainstrain CCM 8649

Profile

Physiology
Gram staining propertiesGram-negative
Shaperod
MobilityNot Available
Flagellar presenceNot Available
Number of membranesNot Available
Ecology, Host, and Life Cycle
Oxygen requirementsNot Available
Optimal temperatureNot Available
Temperature rangeNot Available
HabitatNot Available
Biotic relationshipNot Available
Host(s)Not Available
Cell arrangementNot Available
SporulationNot Available
Energy sourceNot Available
PathogenicityNot Available

Genome Summary

Hymenobacter coccineus strain CCM 8649

Gene Summary

Adenine Count

Not Available

Thymine Count

Not Available

Guanine Count

Not Available

Cytosine Count

Not Available

Genome Length

Not Available

Protein-coding Genes

2223 genes

Non-Coding Genes

16 genes

# of Chromosomes/Plasmids

1

Genes

NameLocus TagUniProt IDStrand OrientationGene Start/EndProtein Molecular Weight
penicillin-binding proteinBEN49_01220Not AvailableNegative3622973 - 362373727511.6
d-alanine--d-alanine ligaseBEN49_01225Not AvailableNegative3623832 - 362655298573.2
copper homeostasis protein cutcBEN49_01230Not AvailableNegative3626810 - 362751423576.6
glycosylasparaginaseBEN49_01235Not AvailableNegative3627511 - 362852735159.3
n-acetylglucosamine kinaseBEN49_01240Not AvailablePositive3628595 - 362945530451.2
nadh oxidaseBEN49_01250Not AvailablePositive3631079 - 363136910632.5
hypothetical proteinBEN49_01260Not AvailablePositive3633754 - 363579972797.7
hypothetical proteinBEN49_01265Not AvailableNegative3635896 - 363670829351.1
lipoprotein abc transporter atp-binding proteinBEN49_01270Not AvailableNegative3637213 - 363786924414.4
succinate--coa ligase subunit betaBEN49_01275Not AvailablePositive3638130 - 363932642923.7

Displaying genes 2891 – 2900 of 4504 in total

Pathways

0 pathways

No pathways found

No metabolic pathways have been associated with this bacterium yet.

Metabolites

0 records
Metabolite IDMetabolite nameStructureCAS number
No metabolites foundTry different search terms or mass values.

Displaying 0 metabolites

Health Effects

No health effects information available for this bacterium.