Rhodobacteraceae bacterium (ex Bugula neritina AB1)

Kingdom

Pseudomonadati

Phylum

Pseudomonadota

Class

Alphaproteobacteria

Order

Rhodobacterales

Family

Paracoccaceae

Genus

Description

Rhodobacteraceae bacterium, specifically identified as ex Bugula neritina AB1, is a notable member of the Rhodobacteraceae family. This bacterium is characterized by having a single replicon, which is significant for its genetic stability and replication processes. The genomic information for this organism is cataloged under the accession number MDLF00000000.1, providing a reference point for further studies and data retrieval. As a member of the Rhodobacteraceae family, this bacterium is likely to be involved in various ecological interactions, particularly in marine environments since it was isolated from the marine bryozoan Bugula neritina. The ecological roles of Rhodobacteraceae family members often include contributions to nutrient cycling, particularly in the ocean, where they can participate in the degradation of organic matter and potentially in biogeochemical processes. The presence of Rhodobacteraceae bacterium in association with marine organisms like Bugula neritina suggests a symbiotic relationship, which may enhance the host's survival and nutrient acquisition. This relationship underscores the importance of microbial diversity in marine ecosystems, where bacteria can play critical roles in the health and sustainability of marine life. Understanding the traits and behaviors of such bacteria can provide insights into the complex interactions within marine habitats and their contributions to ecological balance.

Profile

Physiology
Gram staining propertiesNot Available
ShapeNot Available
MobilityNot Available
Flagellar presenceNot Available
Number of membranesNot Available
Ecology, Host, and Life Cycle
Oxygen requirementsNot Available
Optimal temperatureNot Available
Temperature rangeNot Available
HabitatNot Available
Biotic relationshipNot Available
Host(s)Not Available
Cell arrangementNot Available
SporulationNot Available
Energy sourceNot Available
PathogenicityNot Available

Genome Summary

Rhodobacteraceae bacterium (ex Bugula neritina AB1) isolate AB1-7

Gene Summary

Adenine Count

930029 bp

Thymine Count

922374 bp

Guanine Count

1402823 bp

Cytosine Count

1415261 bp

Genome Length

4671673 bp

Protein-coding Genes

4254 genes

Non-Coding Genes

57 genes

# of Chromosomes/Plasmids

1

Genes

NameLocus TagUniProt IDStrand OrientationGene Start/EndProtein Molecular Weight
protocatechuate 3,4-dioxygenase subunit alphaAB838_16940Not AvailableNegative3589953 - 359057322555.5
protocatechuate 3,4-dioxygenase subunit betaAB838_16945Not AvailableNegative3590577 - 359130527321.2
4-carboxymuconolactone decarboxylaseAB838_16950Not AvailableNegative3591302 - 359168213814.4
3-oxoadipate enol-lactonaseAB838_16955Not AvailableNegative3591675 - 359246027926.3
hypothetical proteinAB838_16960Not AvailableNegative3592464 - 359403858125.8
trap transporterAB838_16965Not AvailableNegative3594035 - 359596666844.9
hypothetical proteinAB838_16970Not AvailableNegative3596052 - 359705634808.2
hypothetical proteinAB838_16975Not AvailableNegative3597150 - 359807033351.4
hypothetical proteinAB838_16980Not AvailableNegative3598413 - 359908124460.8
hypothetical proteinAB838_16985Not AvailableNegative3599078 - 360014240002.5

Displaying genes 3271 – 3280 of 4311 in total

Pathways

0 pathways

No pathways found

No metabolic pathways have been associated with this bacterium yet.

Metabolites

0 records
Metabolite IDMetabolite nameStructureCAS number
No metabolites foundTry different search terms or mass values.

Displaying 0 metabolites

Health Effects

No health effects information available for this bacterium.