PVC group bacterium (ex Bugula neritina AB1)

Kingdom

Pseudomonadati

Phylum

Class

Order

Family

Genus

Description

The PVC group bacterium, specifically the strain derived from Bugula neritina AB1, is characterized by having a single replicon. This trait indicates a streamlined genomic structure, which may have implications for its replication and genetic stability. The genome of this bacterium is cataloged under the accession number MDLB00000000.1, facilitating its identification and study within microbial databases. This bacterium belongs to the PVC superphylum, which encompasses diverse microorganisms known for their unique evolutionary traits and ecological roles. Members of this group are often involved in various biogeochemical processes, contributing to nutrient cycling and ecosystem dynamics. An important ecological insight regarding the PVC group bacterium pertains to its potential interactions within marine environments, particularly in association with the bryozoan Bugula neritina. Such relationships may influence the microbial community structure and overall health of the host organism. By studying this bacterium, researchers can gain a better understanding of its role in the marine microbiome and its contributions to the ecological balance. In summary, the PVC group bacterium associated with Bugula neritina AB1, with its single replicon and specific genomic identification, offers valuable insights into microbial ecology and the intricate relationships within marine ecosystems.

Profile

Physiology
Gram staining propertiesNot Available
ShapeNot Available
MobilityNot Available
Flagellar presenceNot Available
Number of membranesNot Available
Ecology, Host, and Life Cycle
Oxygen requirementsNot Available
Optimal temperatureNot Available
Temperature rangeNot Available
HabitatNot Available
Biotic relationshipNot Available
Host(s)Not Available
Cell arrangementNot Available
SporulationNot Available
Energy sourceNot Available
PathogenicityNot Available

Genome Summary

PVC group bacterium (ex Bugula neritina AB1) isolate AB1-3

Gene Summary

Adenine Count

619720 bp

Thymine Count

625346 bp

Guanine Count

326237 bp

Cytosine Count

335199 bp

Genome Length

1907665 bp

Protein-coding Genes

1319 genes

Non-Coding Genes

96 genes

# of Chromosomes/Plasmids

1

Genes

NameLocus TagUniProt IDStrand OrientationGene Start/EndProtein Molecular Weight
hypothetical proteinAB834_00315Not AvailableNegative64915 - 6573631487.9
hypothetical proteinAB834_00320Not AvailableNegative65909 - 6653823159.9
hypothetical proteinAB834_00325Not AvailableNegative66643 - 6736829860.9
tyrosine recombinase xercAB834_00330Not AvailablePositive67919 - 6881835022.6
hypothetical proteinAB834_00335Not AvailablePositive68863 - 7039256321.9
hypothetical proteinAB834_00340Not AvailableNegative70490 - 7084013873.7
hypothetical proteinAB834_00345Not AvailablePositive71053 - 7161022438.2
hypothetical proteinAB834_00350Not AvailableNegative71643 - 7218520956.3
diaminopimelate decarboxylaseAB834_00355Not AvailablePositive72414 - 7366146668.2
diaminopimelate epimeraseAB834_00360Not AvailablePositive73739 - 7458431104.3

Displaying genes 51 – 60 of 1415 in total

Pathways

0 pathways

No pathways found

No metabolic pathways have been associated with this bacterium yet.

Metabolites

0 records
Metabolite IDMetabolite nameStructureCAS number
No metabolites foundTry different search terms or mass values.

Displaying 0 metabolites

Health Effects

No health effects information available for this bacterium.