PVC group bacterium (ex Bugula neritina AB1)

Kingdom

Pseudomonadati

Phylum

Class

Order

Family

Genus

Description

The PVC group bacterium, specifically the strain derived from Bugula neritina AB1, is characterized by having a single replicon. This trait indicates a streamlined genomic structure, which may have implications for its replication and genetic stability. The genome of this bacterium is cataloged under the accession number MDLB00000000.1, facilitating its identification and study within microbial databases. This bacterium belongs to the PVC superphylum, which encompasses diverse microorganisms known for their unique evolutionary traits and ecological roles. Members of this group are often involved in various biogeochemical processes, contributing to nutrient cycling and ecosystem dynamics. An important ecological insight regarding the PVC group bacterium pertains to its potential interactions within marine environments, particularly in association with the bryozoan Bugula neritina. Such relationships may influence the microbial community structure and overall health of the host organism. By studying this bacterium, researchers can gain a better understanding of its role in the marine microbiome and its contributions to the ecological balance. In summary, the PVC group bacterium associated with Bugula neritina AB1, with its single replicon and specific genomic identification, offers valuable insights into microbial ecology and the intricate relationships within marine ecosystems.

Profile

Physiology
Gram staining propertiesNot Available
ShapeNot Available
MobilityNot Available
Flagellar presenceNot Available
Number of membranesNot Available
Ecology, Host, and Life Cycle
Oxygen requirementsNot Available
Optimal temperatureNot Available
Temperature rangeNot Available
HabitatNot Available
Biotic relationshipNot Available
Host(s)Not Available
Cell arrangementNot Available
SporulationNot Available
Energy sourceNot Available
PathogenicityNot Available

Genome Summary

PVC group bacterium (ex Bugula neritina AB1) isolate AB1-3

Gene Summary

Adenine Count

619720 bp

Thymine Count

625346 bp

Guanine Count

326237 bp

Cytosine Count

335199 bp

Genome Length

1907665 bp

Protein-coding Genes

1319 genes

Non-Coding Genes

96 genes

# of Chromosomes/Plasmids

1

Genes

NameLocus TagUniProt IDStrand OrientationGene Start/EndProtein Molecular Weight
rod shape-determining protein rodaAB834_03245Not AvailableNegative756742 - 75783041046.5
penicillin-binding protein 2AB834_03250Not AvailableNegative757835 - 75963769177.0
hypothetical proteinAB834_03255Not AvailableNegative759634 - 76013119058.9
rod shape-determining protein mrecAB834_03260Not AvailableNegative760134 - 76094330170.1
rod shape-determining proteinAB834_03265Not AvailableNegative760940 - 76197737087.4
Tmrna,resume consensus sequence (at 85): aatagatgcaaaatcgtcNot AvailableNot AvailablePositive762388 - 762809Not Available
hypothetical proteinAB834_03280Not AvailableNegative764573 - 76656475504.2
hypothetical proteinAB834_03285Not AvailableNegative766719 - 76748928842.9
ornithine decarboxylaseAB834_03295Not AvailablePositive769244 - 77040744118.0
hypothetical proteinAB834_03300Not AvailableNegative770404 - 77089818860.2

Displaying genes 581 – 590 of 1415 in total

Pathways

0 pathways

No pathways found

No metabolic pathways have been associated with this bacterium yet.

Metabolites

0 records
Metabolite IDMetabolite nameStructureCAS number
No metabolites foundTry different search terms or mass values.

Displaying 0 metabolites

Health Effects

No health effects information available for this bacterium.