PVC group bacterium (ex Bugula neritina AB1)

Kingdom

Pseudomonadati

Phylum

Class

Order

Family

Genus

Description

The PVC group bacterium, specifically the strain derived from Bugula neritina AB1, is characterized by having a single replicon. This trait indicates a streamlined genomic structure, which may have implications for its replication and genetic stability. The genome of this bacterium is cataloged under the accession number MDLB00000000.1, facilitating its identification and study within microbial databases. This bacterium belongs to the PVC superphylum, which encompasses diverse microorganisms known for their unique evolutionary traits and ecological roles. Members of this group are often involved in various biogeochemical processes, contributing to nutrient cycling and ecosystem dynamics. An important ecological insight regarding the PVC group bacterium pertains to its potential interactions within marine environments, particularly in association with the bryozoan Bugula neritina. Such relationships may influence the microbial community structure and overall health of the host organism. By studying this bacterium, researchers can gain a better understanding of its role in the marine microbiome and its contributions to the ecological balance. In summary, the PVC group bacterium associated with Bugula neritina AB1, with its single replicon and specific genomic identification, offers valuable insights into microbial ecology and the intricate relationships within marine ecosystems.

Profile

Physiology
Gram staining propertiesNot Available
ShapeNot Available
MobilityNot Available
Flagellar presenceNot Available
Number of membranesNot Available
Ecology, Host, and Life Cycle
Oxygen requirementsNot Available
Optimal temperatureNot Available
Temperature rangeNot Available
HabitatNot Available
Biotic relationshipNot Available
Host(s)Not Available
Cell arrangementNot Available
SporulationNot Available
Energy sourceNot Available
PathogenicityNot Available

Genome Summary

PVC group bacterium (ex Bugula neritina AB1) isolate AB1-3

Gene Summary

Adenine Count

619720 bp

Thymine Count

625346 bp

Guanine Count

326237 bp

Cytosine Count

335199 bp

Genome Length

1907665 bp

Protein-coding Genes

1319 genes

Non-Coding Genes

96 genes

# of Chromosomes/Plasmids

1

Genes

NameLocus TagUniProt IDStrand OrientationGene Start/EndProtein Molecular Weight
hypothetical proteinAB834_05790Not AvailablePositive1410380 - 141205962737.7
hypothetical proteinAB834_05795Not AvailablePositive1412330 - 141357447650.3
hypothetical proteinAB834_05800Not AvailablePositive1413702 - 141471238264.4
Trna-gluNot AvailableNot AvailablePositive1415110 - 1415187Not Available
Trna-lysNot AvailableNot AvailablePositive1415198 - 1415270Not Available
ribosome recycling factorAB834_05815Not AvailableNegative1415344 - 141590421315.5
ump kinaseAB834_05820Not AvailableNegative1415909 - 141664026463.4
translation elongation factor tsAB834_05825Not AvailableNegative1416671 - 141744727981.4
30s ribosomal protein s2AB834_05830Not AvailableNegative1417502 - 141851238215.1
hypothetical proteinAB834_05835Not AvailableNegative1418732 - 141928020911.2

Displaying genes 1061 – 1070 of 1415 in total

Pathways

0 pathways

No pathways found

No metabolic pathways have been associated with this bacterium yet.

Metabolites

0 records
Metabolite IDMetabolite nameStructureCAS number
No metabolites foundTry different search terms or mass values.

Displaying 0 metabolites

Health Effects

No health effects information available for this bacterium.