Clavibacter michiganensis strain CFBP8019

Gram-positiveRodNon-motileAerobe

Kingdom

Bacillati

Phylum

Actinomycetota

Class

Actinomycetes

Order

Micrococcales

Family

Microbacteriaceae

Genus

Clavibacter

Description

Clavibacter michiganensis strain CFBP8019 is a Gram-positive, rod-shaped bacterium that exhibits aerobic respiration and is characterized by its lack of mobility, as it possesses flagella. This strain is mesophilic, with an optimal growth temperature of 25°C, and it demonstrates a free-living biotic relationship in various habitats. One significant aspect of C. michiganensis strain CFBP8019 is its pathogenicity towards several host plants, including Triticum aestivum (wheat), Solanum tuberosum (potato), Solanum lycopersicum (tomato), Solanum melongena (eggplant), Zea mays subsp. mays (maize), and Medicago sativa (alfalfa), among others in the Solanaceae, Fabaceae, and Poaceae families. This bacterium is known to cause a range of health issues in these plants, such as bacterial wilt, canker, and specific diseases like Goss's wilt in maize and bacterial canker in pepper. The ability of C. michiganensis strain CFBP8019 to affect multiple crops highlights its ecological significance, as it poses a threat to agricultural productivity and plant health. Its pathogenic capabilities can lead to severe agricultural losses, thereby impacting food supply and ecosystem balance. Understanding the traits and interactions of this bacterium is crucial for developing effective management strategies in agriculture to mitigate its effects.

Taxonomy

KingdomBacillati
PhylumActinomycetota
ClassActinomycetes
OrderMicrococcales
FamilyMicrobacteriaceae
GenusClavibacter
SpeciesClavibacter michiganensis
Strainstrain CFBP8019

Profile

Physiology
Gram staining propertiesPositive
ShapeRod
MobilityNo
Flagellar presenceYes
Number of membranes1
Image of Clavibacter michiganensis strain CFBP8019
AI-generated image based on bacteria physiology
Ecology, Host, and Life Cycle
Oxygen requirementsAerobe
Optimal temperature25
Temperature rangeMesophilic
HabitatMultiple
Biotic relationshipFree living
Host(s)Triticum aestivum, Solanum tuberosum, Solanum lycopersicum
Cell arrangementPairs - Singles
SporulationNot Available
Energy sourceNot Available
Pathogenicityeggplant

Genome Summary

Clavibacter michiganensis strain CFBP8019 CFBP8019_contig000018,

Gene Summary

Adenine Count

400466 bp

Thymine Count

401732 bp

Guanine Count

1114080 bp

Cytosine Count

1107872 bp

Genome Length

3024150 bp

Protein-coding Genes

2840 genes

Non-Coding Genes

46 genes

# of Chromosomes/Plasmids

1

Genes

NameLocus TagUniProt IDStrand OrientationGene Start/EndProtein Molecular Weight
cell division protein ftslBFL37_01305Not AvailablePositive270742 - 27141622620.7
penicillin-binding protein pbpbBFL37_01310Not AvailablePositive271508 - 27328962676.8
udp-n-acetylmuramoyl-l-alanyl-d-glutamate--2, 6-diaminopimelate ligaseBFL37_01315Not AvailablePositive273302 - 27484654740.4
udp-n-acetylmuramoyl-tripeptide--d-alanyl-d- alanine ligaseBFL37_01320Not AvailablePositive274848 - 27625749492.4
phospho-n-acetylmuramoyl-pentapeptide- transferaseBFL37_01325Not AvailablePositive276251 - 27736039704.2
udp-n-acetylmuramoylalanine--d-glutamate ligaseBFL37_01330Not AvailablePositive277363 - 27890754778.6
lipid ii flippase ftswBFL37_01335Not AvailablePositive278864 - 28015345546.2
udp-n-acetylglucosamine--n-acetylmuramyl- (pentapeptide) pyrophosphoryl-undecaprenol n-acetylglucosamine transferaseBFL37_01340Not AvailablePositive280150 - 28124137617.6
udp-n-acetylmuramate--l-alanine ligaseBFL37_01345Not AvailablePositive281282 - 28271250321.1
response regulator protein vrarBFL37_01350Not AvailablePositive282946 - 28363224626.6

Displaying genes 261 – 270 of 2886 in total

Pathways

0 pathways

No pathways found

No metabolic pathways have been associated with this bacterium yet.

Metabolites

0 records
Metabolite IDMetabolite nameStructureCAS number
No metabolites foundTry different search terms or mass values.

Displaying 0 metabolites

Health Effects

Health ConditionRelationReference
Goss s wiltCausesPMC6622472
Bacterial wiltCausesPMC9190982
CankerCausesPMC9190982
Bacterial wilt and canker of tomatoCausesPMC9190982
Potato ring rotCausesPMC9190982
Gross's wilt of maizeCausesPMC9190982
Bacterial canker of pepperCausesPMC9190982
Bacterial wilt of alfalfaCausesPMC9190982
Bacterial mosaic of wheatCausesPMC9190982
Bean leaf yellowingCausesPMC9190982

Displaying health effects 1 – 10 of 15 in total