Idiomarina sp. MD25a

Kingdom

Pseudomonadati

Phylum

Pseudomonadota

Class

Gammaproteobacteria

Order

Alteromonadales

Family

Idiomarinaceae

Genus

Idiomarina

Description

Idiomarina sp. MD25a is a notable strain characterized by the presence of flagella, which indicates its motility and potential ability to navigate its environment. This trait may facilitate its interactions within its ecosystem, including nutrient acquisition and competition with other microorganisms. Furthermore, Idiomarina sp. MD25a is defined by having a single replicon, suggesting a streamlined genetic organization that may contribute to its adaptability and efficiency in replication. The strain is listed under the accession number MDGT00000000.1, which allows for the tracking and reference of its genomic data in scientific databases. This identification is crucial for further research and understanding of the strain's genomic features and potential applications. Biologically, the presence of flagella in Idiomarina sp. MD25a may provide insights into its ecological role, as motile bacteria often play significant roles in biogeochemical cycles and the breakdown of organic matter. The combination of motility and a streamlined genomic structure suggests that Idiomarina sp. MD25a could be an effective competitor in its niche, potentially influencing microbial community dynamics and contributing to the overall health of its environment.

Taxonomy

KingdomPseudomonadati
PhylumPseudomonadota
ClassGammaproteobacteria
OrderAlteromonadales
FamilyIdiomarinaceae
GenusIdiomarina
SpeciesIdiomarina sp. MD25a
StrainNo strain

Profile

Physiology
Gram staining propertiesNot Available
ShapeNot Available
MobilityNot Available
Flagellar presenceYes
Number of membranesNot Available
Ecology, Host, and Life Cycle
Oxygen requirementsNot Available
Optimal temperatureNot Available
Temperature rangeNot Available
HabitatNot Available
Biotic relationshipNot Available
Host(s)Not Available
Cell arrangementNot Available
SporulationNot Available
Energy sourceNot Available
PathogenicityNot Available

Genome Summary

Idiomarina sp. MD25a Contig_48, whole genome shotgun sequence.

Gene Summary

Adenine Count

705377 bp

Thymine Count

702516 bp

Guanine Count

649030 bp

Cytosine Count

623289 bp

Genome Length

2680246 bp

Protein-coding Genes

2463 genes

Non-Coding Genes

60 genes

# of Chromosomes/Plasmids

1

Genes

NameLocus TagUniProt IDStrand OrientationGene Start/EndProtein Molecular Weight
50s ribosomal protein l23BFR57_11865Not AvailableNegative2182583 - 218288511180.6
50s ribosomal protein l4BFR57_11870Not AvailableNegative2182882 - 218348722233.8
50s ribosomal protein l3BFR57_11875Not AvailableNegative2183506 - 218414422510.9
30s ribosomal protein s10BFR57_11880Not AvailableNegative2184183 - 218449411714.3
peptidase m19BFR57_11885Not AvailableNegative2184768 - 218596444267.5
hypothetical proteinBFR57_11890Not AvailableNegative2186131 - 21863979472.81
trna dihydrouridine(20/20a) synthase dusaBFR57_11895Not AvailableNegative2186588 - 218754435710.7
transcriptional repressorBFR57_11900Not AvailablePositive2187795 - 218823516318.5
aminopeptidaseBFR57_11905Not AvailablePositive2188263 - 219060890455.9
hypothetical proteinBFR57_11910Not AvailablePositive2190586 - 219110719905.6

Displaying genes 2071 – 2080 of 2523 in total

Pathways

0 pathways

No pathways found

No metabolic pathways have been associated with this bacterium yet.

Metabolites

0 records
Metabolite IDMetabolite nameStructureCAS number
No metabolites foundTry different search terms or mass values.

Displaying 0 metabolites

Health Effects

No health effects information available for this bacterium.