Idiomarina sp. MD25a

Kingdom

Pseudomonadati

Phylum

Pseudomonadota

Class

Gammaproteobacteria

Order

Alteromonadales

Family

Idiomarinaceae

Genus

Idiomarina

Description

Idiomarina sp. MD25a is a notable strain characterized by the presence of flagella, which indicates its motility and potential ability to navigate its environment. This trait may facilitate its interactions within its ecosystem, including nutrient acquisition and competition with other microorganisms. Furthermore, Idiomarina sp. MD25a is defined by having a single replicon, suggesting a streamlined genetic organization that may contribute to its adaptability and efficiency in replication. The strain is listed under the accession number MDGT00000000.1, which allows for the tracking and reference of its genomic data in scientific databases. This identification is crucial for further research and understanding of the strain's genomic features and potential applications. Biologically, the presence of flagella in Idiomarina sp. MD25a may provide insights into its ecological role, as motile bacteria often play significant roles in biogeochemical cycles and the breakdown of organic matter. The combination of motility and a streamlined genomic structure suggests that Idiomarina sp. MD25a could be an effective competitor in its niche, potentially influencing microbial community dynamics and contributing to the overall health of its environment.

Taxonomy

KingdomPseudomonadati
PhylumPseudomonadota
ClassGammaproteobacteria
OrderAlteromonadales
FamilyIdiomarinaceae
GenusIdiomarina
SpeciesIdiomarina sp. MD25a
StrainNo strain

Profile

Physiology
Gram staining propertiesNot Available
ShapeNot Available
MobilityNot Available
Flagellar presenceYes
Number of membranesNot Available
Ecology, Host, and Life Cycle
Oxygen requirementsNot Available
Optimal temperatureNot Available
Temperature rangeNot Available
HabitatNot Available
Biotic relationshipNot Available
Host(s)Not Available
Cell arrangementNot Available
SporulationNot Available
Energy sourceNot Available
PathogenicityNot Available

Genome Summary

Idiomarina sp. MD25a Contig_48, whole genome shotgun sequence.

Gene Summary

Adenine Count

705377 bp

Thymine Count

702516 bp

Guanine Count

649030 bp

Cytosine Count

623289 bp

Genome Length

2680246 bp

Protein-coding Genes

2463 genes

Non-Coding Genes

60 genes

# of Chromosomes/Plasmids

1

Genes

NameLocus TagUniProt IDStrand OrientationGene Start/EndProtein Molecular Weight
permeaseBFR57_05350Not AvailableNegative2017130 - 201785826232.9
cell division protein ftsbBFR57_05355Not AvailablePositive2017935 - 201822211460.9
2-c-methyl-d-erythritol 4-phosphate cytidylyltransferaseBFR57_05360Not AvailablePositive2018224 - 201893125388.4
2-c-methyl-d-erythritol 2,4-cyclodiphosphate synthaseBFR57_05365Not AvailablePositive2018928 - 201941317023.3
trna pseudouridine(13) synthase trudBFR57_05370Not AvailablePositive2019410 - 202047140533.7
5'/3'-nucleotidase sureBFR57_05375Not AvailablePositive2020452 - 202121027642.5
protein-l-isoaspartate o-methyltransferaseBFR57_05380Not AvailablePositive2021200 - 202183823495.5
hypothetical proteinBFR57_05385Not AvailablePositive2021835 - 202241921752.4
peptidase m23BFR57_05390Not AvailablePositive2022436 - 202332932858.1
rna polymerase sigma factor rposBFR57_05395Not AvailablePositive2023400 - 202440138105.3

Displaying genes 1891 – 1900 of 2523 in total

Pathways

0 pathways

No pathways found

No metabolic pathways have been associated with this bacterium yet.

Metabolites

0 records
Metabolite IDMetabolite nameStructureCAS number
No metabolites foundTry different search terms or mass values.

Displaying 0 metabolites

Health Effects

No health effects information available for this bacterium.