Idiomarina sp. MD25a

Kingdom

Pseudomonadati

Phylum

Pseudomonadota

Class

Gammaproteobacteria

Order

Alteromonadales

Family

Idiomarinaceae

Genus

Idiomarina

Description

Idiomarina sp. MD25a is a notable strain characterized by the presence of flagella, which indicates its motility and potential ability to navigate its environment. This trait may facilitate its interactions within its ecosystem, including nutrient acquisition and competition with other microorganisms. Furthermore, Idiomarina sp. MD25a is defined by having a single replicon, suggesting a streamlined genetic organization that may contribute to its adaptability and efficiency in replication. The strain is listed under the accession number MDGT00000000.1, which allows for the tracking and reference of its genomic data in scientific databases. This identification is crucial for further research and understanding of the strain's genomic features and potential applications. Biologically, the presence of flagella in Idiomarina sp. MD25a may provide insights into its ecological role, as motile bacteria often play significant roles in biogeochemical cycles and the breakdown of organic matter. The combination of motility and a streamlined genomic structure suggests that Idiomarina sp. MD25a could be an effective competitor in its niche, potentially influencing microbial community dynamics and contributing to the overall health of its environment.

Taxonomy

KingdomPseudomonadati
PhylumPseudomonadota
ClassGammaproteobacteria
OrderAlteromonadales
FamilyIdiomarinaceae
GenusIdiomarina
SpeciesIdiomarina sp. MD25a
StrainNo strain

Profile

Physiology
Gram staining propertiesNot Available
ShapeNot Available
MobilityNot Available
Flagellar presenceYes
Number of membranesNot Available
Ecology, Host, and Life Cycle
Oxygen requirementsNot Available
Optimal temperatureNot Available
Temperature rangeNot Available
HabitatNot Available
Biotic relationshipNot Available
Host(s)Not Available
Cell arrangementNot Available
SporulationNot Available
Energy sourceNot Available
PathogenicityNot Available

Genome Summary

Idiomarina sp. MD25a Contig_48, whole genome shotgun sequence.

Gene Summary

Adenine Count

705377 bp

Thymine Count

702516 bp

Guanine Count

649030 bp

Cytosine Count

623289 bp

Genome Length

2680246 bp

Protein-coding Genes

2463 genes

Non-Coding Genes

60 genes

# of Chromosomes/Plasmids

1

Genes

NameLocus TagUniProt IDStrand OrientationGene Start/EndProtein Molecular Weight
short-chain dehydrogenaseBFR57_04600Not AvailableNegative1871395 - 187205723768.3
aspartate ammonia-lyaseBFR57_04605Not AvailableNegative1872069 - 187344249200.9
hypothetical proteinBFR57_04610Not AvailablePositive1873627 - 187426523434.9
hypothetical proteinBFR57_04615Not AvailablePositive1874265 - 187654484875.7
hypothetical proteinBFR57_04620Not AvailablePositive1876537 - 187739430797.0
cyanoglobinBFR57_04625Not AvailablePositive1877446 - 187782613766.3
redox-regulated atpase ychfBFR57_04630Not AvailableNegative1877890 - 187898139311.6
aminoacyl-trna hydrolaseBFR57_04635Not AvailableNegative1878993 - 187958321408.8
50s ribosomal protein l25/general stress protein ctcBFR57_04640Not AvailableNegative1879602 - 188026424609.1
ribose-phosphate pyrophosphokinaseBFR57_04645Not AvailableNegative1880419 - 188136634427.5

Displaying genes 1741 – 1750 of 2523 in total

Pathways

0 pathways

No pathways found

No metabolic pathways have been associated with this bacterium yet.

Metabolites

0 records
Metabolite IDMetabolite nameStructureCAS number
No metabolites foundTry different search terms or mass values.

Displaying 0 metabolites

Health Effects

No health effects information available for this bacterium.