Pseudomonas graminis strain UASWS1507 9

Kingdom

Pseudomonadati

Phylum

Pseudomonadota

Class

Gammaproteobacteria

Order

Pseudomonadales

Family

Pseudomonadaceae

Genus

Pseudomonas

Description

Pseudomonas graminis strain UASWS1507 is characterized by a single replicon, indicating a relatively simple genomic structure. This strain has been cataloged under the accession number MDEN00000000.1, which allows for easy reference and retrieval of its genetic information in scientific databases. As a member of the Pseudomonas genus, this strain is likely to exhibit traits commonly associated with Pseudomonas species, such as metabolic versatility and the ability to thrive in various environments. These characteristics suggest its potential role in ecological interactions, particularly in soil and plant-associated environments. The presence of only one replicon may imply a streamlined genomic organization, which could be advantageous for rapid adaptation to changing environmental conditions. Such adaptations are crucial for survival in diverse habitats, where competition for resources is intense. In summary, Pseudomonas graminis strain UASWS1507, with its single replicon and documented genetic accessions, represents an important subject for further studies on soil microbiology and plant health. Its genetic makeup may reveal insights into its ecological role and functional capabilities, particularly in promoting plant growth or soil nutrient cycling, areas that warrant additional research to fully understand its contributions to ecosystem dynamics.

Taxonomy

KingdomPseudomonadati
PhylumPseudomonadota
ClassGammaproteobacteria
OrderPseudomonadales
FamilyPseudomonadaceae
GenusPseudomonas
SpeciesPseudomonas graminis
Strainstrain UASWS1507 9

Profile

Physiology
Gram staining propertiesNot Available
ShapeNot Available
MobilityNot Available
Flagellar presenceNot Available
Number of membranesNot Available
Image of Pseudomonas graminis strain UASWS1507 9
Image source: Wikipedia/Wikimedia
Ecology, Host, and Life Cycle
Oxygen requirementsNot Available
Optimal temperatureNot Available
Temperature rangeNot Available
HabitatNot Available
Biotic relationshipNot Available
Host(s)Not Available
Cell arrangementNot Available
SporulationNot Available
Energy sourceNot Available
PathogenicityNot Available

Genome Summary

Pseudomonas graminis strain UASWS1507 9, whole genome shotgun

Gene Summary

Adenine Count

1180470 bp

Thymine Count

1188035 bp

Guanine Count

1802234 bp

Cytosine Count

1787147 bp

Genome Length

5957886 bp

Protein-coding Genes

5045 genes

Non-Coding Genes

0 genes

# of Chromosomes/Plasmids

1

Genes

NameLocus TagUniProt IDStrand OrientationGene Start/EndProtein Molecular Weight
escs/yscs/hrcs family type iii secretion system export apparatus proteinBBI10_14060Not AvailableNegative3217612 - 32178789317.93
escr/yscr/hrcr family type iii secretion system export apparatus proteinBBI10_14065Not AvailableNegative3217886 - 321853924110.5
hypothetical proteinBBI10_14075Not AvailableNegative3219002 - 321980829110.6
hypothetical proteinBBI10_14080Not AvailableNegative3219898 - 322045220147.7
type iii secretion proteinBBI10_14085Not AvailableNegative3220449 - 322090417569.6
flagellum-specific atp synthase fliiBBI10_14090Not AvailableNegative3220909 - 322225848406.8
escd/yscd/hrpq family type iii secretion system inner membrane ring proteinBBI10_14095Not AvailableNegative3222255 - 322324735927.5
escv/yscv/hrcv family type iii secretion system export apparatus proteinBBI10_14100Not AvailableNegative3223266 - 322540177970.3
sepl/tyea/hrpj family type iii secretion system gatekeeperBBI10_14105Not AvailableNegative3225401 - 322650440086.6
rna polymerase subunit sigmaBBI10_14110Not AvailablePositive3226775 - 322732621070.2

Displaying genes 2681 – 2690 of 5045 in total

Pathways

0 pathways

No pathways found

No metabolic pathways have been associated with this bacterium yet.

Metabolites

0 records
Metabolite IDMetabolite nameStructureCAS number
No metabolites foundTry different search terms or mass values.

Displaying 0 metabolites

Health Effects

No health effects information available for this bacterium.