Xanthomonas dyei strain CFBP7245 Xd-CFBP7245-G1152

Rod

Kingdom

Pseudomonadati

Phylum

Pseudomonadota

Class

Gammaproteobacteria

Order

Lysobacterales

Family

Lysobacteraceae

Genus

Xanthomonas

Description

Xanthomonas dyei strain CFBP7245, designated as Xd-CFBP7245-G1152, is characterized as a rod-shaped bacterium. This strain possesses flagella, which suggests motility and potentially enhances its ability to colonize various environments. Notably, it has a single replicon, indicating a streamlined genetic organization that may contribute to its adaptability and efficiency in replication. The strain is cataloged under the accession number MDEE00000000.1, which provides a reference point for genomic and taxonomic studies. The genomic data associated with this accession can facilitate further research into the genetic traits and mechanisms that underpin the biology of Xanthomonas dyei. Xanthomonas species are known for their roles as plant pathogens, often causing significant agricultural losses. While specific pathogenicity traits of Xd-CFBP7245 are not detailed in the provided information, the presence of flagella could imply a capacity for host interaction or environmental adaptation, which is critical for survival and proliferation in various ecological niches. In summary, the morphological and genetic attributes of Xanthomonas dyei strain CFBP7245 highlight its potential ecological roles, particularly in relation to its motility and genetic organization. These characteristics may play a significant part in its interactions with plant hosts and its overall impact in agricultural ecosystems.

Taxonomy

KingdomPseudomonadati
PhylumPseudomonadota
ClassGammaproteobacteria
OrderLysobacterales
FamilyLysobacteraceae
GenusXanthomonas
SpeciesXanthomonas dyei
Strainstrain CFBP7245 Xd-CFBP7245-G1152

Profile

Physiology
Gram staining propertiesNot Available
ShapeRod
MobilityNot Available
Flagellar presenceYes
Number of membranesNot Available
Image of Xanthomonas dyei strain CFBP7245 Xd-CFBP7245-G1152
Image source: Wikipedia/Wikimedia
Ecology, Host, and Life Cycle
Oxygen requirementsNot Available
Optimal temperatureNot Available
Temperature rangeNot Available
HabitatNot Available
Biotic relationshipNot Available
Host(s)Not Available
Cell arrangementNot Available
SporulationNot Available
Energy sourceNot Available
PathogenicityNot Available

Genome Summary

Xanthomonas dyei strain CFBP7245 Xd-CFBP7245-G1152, whole genome

Gene Summary

Adenine Count

945911 bp

Thymine Count

952506 bp

Guanine Count

1709051 bp

Cytosine Count

1706670 bp

Genome Length

5314178 bp

Protein-coding Genes

4241 genes

Non-Coding Genes

233 genes

# of Chromosomes/Plasmids

1

Genes

NameLocus TagUniProt IDStrand OrientationGene Start/EndProtein Molecular Weight
polysaccharide biosynthesis protein gumeXdyCFBP7245_15080Not AvailableNegative3390208 - 339150948138.9
undecaprenyl-phosphate glucose phosphotransferaseXdyCFBP7245_15085Not AvailableNegative3391592 - 339304654658.1
polysaccharide biosynthesis protein gumcXdyCFBP7245_15090Not AvailableNegative3393291 - 339473053848.6
polysaccharide biosynthesis protein gumbXdyCFBP7245_15095Not AvailableNegative3394712 - 339535323190.2
Trna-proNot AvailableNot AvailablePositive3395882 - 3395958Not Available
merr family transcriptional regulatorXdyCFBP7245_15105Not AvailableNegative3396020 - 339637613826.8
integration host factor subunit alphaXdyCFBP7245_15110Not AvailableNegative3396357 - 339665611214.4
phenylalanine--trna ligase subunit betaXdyCFBP7245_15115Not AvailableNegative3396678 - 339905684928.5
phenylalanine--trna ligase subunit alphaXdyCFBP7245_15120Not AvailableNegative3399183 - 340017837234.1
50s ribosomal protein l20XdyCFBP7245_15125Not AvailableNegative3400432 - 340079113340.7

Displaying genes 2991 – 3000 of 4474 in total

Pathways

0 pathways

No pathways found

No metabolic pathways have been associated with this bacterium yet.

Metabolites

0 records
Metabolite IDMetabolite nameStructureCAS number
No metabolites foundTry different search terms or mass values.

Displaying 0 metabolites

Health Effects

No health effects information available for this bacterium.