Xanthomonas dyei strain CFBP7245 Xd-CFBP7245-G1152

Rod

Kingdom

Pseudomonadati

Phylum

Pseudomonadota

Class

Gammaproteobacteria

Order

Lysobacterales

Family

Lysobacteraceae

Genus

Xanthomonas

Description

Xanthomonas dyei strain CFBP7245, designated as Xd-CFBP7245-G1152, is characterized as a rod-shaped bacterium. This strain possesses flagella, which suggests motility and potentially enhances its ability to colonize various environments. Notably, it has a single replicon, indicating a streamlined genetic organization that may contribute to its adaptability and efficiency in replication. The strain is cataloged under the accession number MDEE00000000.1, which provides a reference point for genomic and taxonomic studies. The genomic data associated with this accession can facilitate further research into the genetic traits and mechanisms that underpin the biology of Xanthomonas dyei. Xanthomonas species are known for their roles as plant pathogens, often causing significant agricultural losses. While specific pathogenicity traits of Xd-CFBP7245 are not detailed in the provided information, the presence of flagella could imply a capacity for host interaction or environmental adaptation, which is critical for survival and proliferation in various ecological niches. In summary, the morphological and genetic attributes of Xanthomonas dyei strain CFBP7245 highlight its potential ecological roles, particularly in relation to its motility and genetic organization. These characteristics may play a significant part in its interactions with plant hosts and its overall impact in agricultural ecosystems.

Taxonomy

KingdomPseudomonadati
PhylumPseudomonadota
ClassGammaproteobacteria
OrderLysobacterales
FamilyLysobacteraceae
GenusXanthomonas
SpeciesXanthomonas dyei
Strainstrain CFBP7245 Xd-CFBP7245-G1152

Profile

Physiology
Gram staining propertiesNot Available
ShapeRod
MobilityNot Available
Flagellar presenceYes
Number of membranesNot Available
Image of Xanthomonas dyei strain CFBP7245 Xd-CFBP7245-G1152
Image source: Wikipedia/Wikimedia
Ecology, Host, and Life Cycle
Oxygen requirementsNot Available
Optimal temperatureNot Available
Temperature rangeNot Available
HabitatNot Available
Biotic relationshipNot Available
Host(s)Not Available
Cell arrangementNot Available
SporulationNot Available
Energy sourceNot Available
PathogenicityNot Available

Genome Summary

Xanthomonas dyei strain CFBP7245 Xd-CFBP7245-G1152, whole genome

Gene Summary

Adenine Count

945911 bp

Thymine Count

952506 bp

Guanine Count

1709051 bp

Cytosine Count

1706670 bp

Genome Length

5314178 bp

Protein-coding Genes

4241 genes

Non-Coding Genes

233 genes

# of Chromosomes/Plasmids

1

Genes

NameLocus TagUniProt IDStrand OrientationGene Start/EndProtein Molecular Weight
phosphonopyruvate decarboxylaseXdyCFBP7245_12520Not AvailableNegative2792383 - 279360042825.3
phosphoenolpyruvate mutaseXdyCFBP7245_12525Not AvailableNegative2793597 - 279456235109.6
sigma-54-dependent fis family transcriptional regulatorXdyCFBP7245_12530Not AvailableNegative2795759 - 279773271977.3
carbohydrate kinase family proteinXdyCFBP7245_12535Not AvailableNegative2798226 - 279915834623.2
rod shape-determining proteinXdyCFBP7245_12540Not AvailablePositive2799434 - 280048037399.3
rod shape-determining protein mredXdyCFBP7245_12550Not AvailablePositive2801789 - 280227418038.9
penicillin-binding protein 2XdyCFBP7245_12555Not AvailablePositive2802278 - 280433874608.0
rod shape-determining protein rodaXdyCFBP7245_12560Not AvailablePositive2804335 - 280545340125.3
endopolygalacturonaseXdyCFBP7245_12565Not AvailablePositive2805771 - 280716247429.1
lytic murein transglycosylase bXdyCFBP7245_12570Not AvailablePositive2807596 - 280873540793.6

Displaying genes 2511 – 2520 of 4474 in total

Pathways

0 pathways

No pathways found

No metabolic pathways have been associated with this bacterium yet.

Metabolites

0 records
Metabolite IDMetabolite nameStructureCAS number
No metabolites foundTry different search terms or mass values.

Displaying 0 metabolites

Health Effects

No health effects information available for this bacterium.