Shigella sp. FC2928

Gram-negativeRod

Kingdom

Pseudomonadati

Phylum

Pseudomonadota

Class

Gammaproteobacteria

Order

Enterobacterales

Family

Enterobacteriaceae

Genus

Shigella

Description

Shigella sp. FC2928 is a Gram-negative bacterium characterized by its rod shape and the presence of flagella. This motility feature may play a role in its ecological interactions and pathogenicity. The organism has a single replicon, indicating a streamlined genomic structure, which is typical for members of the genus Shigella. The accession number MDDJ00000000.1 corresponds to the genomic data for Shigella sp. FC2928, providing a resource for further study and analysis of its genetic makeup. As a member of the Shigella genus, this strain is likely to be associated with human gastrointestinal infections, particularly dysentery, due to its pathogenic traits. Understanding the traits of Shigella sp. FC2928 can contribute to insights into its adaptation and survival in various environments, particularly within host organisms. The presence of flagella suggests that this bacterium may have mechanisms for motility that facilitate its colonization and infection processes. The single replicon structure may also reflect an evolutionary adaptation, allowing for efficient replication and resource utilization in competitive environments. In summary, Shigella sp. FC2928, with its Gram-negative, rod-shaped morphology and flagellar motility, exemplifies the characteristics of pathogenic bacteria that are adapted to thrive in specific ecological niches, particularly within the human host.

Taxonomy

KingdomPseudomonadati
PhylumPseudomonadota
ClassGammaproteobacteria
OrderEnterobacterales
FamilyEnterobacteriaceae
GenusShigella
SpeciesShigella sp. FC2928
StrainNo strain

Profile

Physiology
Gram staining propertiesNegative
ShapeRod
MobilityNot Available
Flagellar presenceYes
Number of membranesNot Available
Image of Shigella sp. FC2928
Image source: Wikipedia/Wikimedia
Ecology, Host, and Life Cycle
Oxygen requirementsNot Available
Optimal temperatureNot Available
Temperature rangeNot Available
HabitatNot Available
Biotic relationshipNot Available
Host(s)Not Available
Cell arrangementNot Available
SporulationNot Available
Energy sourceNot Available
PathogenicityNot Available

Genome Summary

Shigella sp. FC2928 NODE_9, whole genome shotgun sequence.

Gene Summary

Adenine Count

1333280 bp

Thymine Count

1335019 bp

Guanine Count

1377585 bp

Cytosine Count

1355684 bp

Genome Length

5401568 bp

Protein-coding Genes

4931 genes

Non-Coding Genes

38 genes

# of Chromosomes/Plasmids

1

Genes

NameLocus TagUniProt IDStrand OrientationGene Start/EndProtein Molecular Weight
anti-sigma factorBFF50_18855Not AvailableNegative3534953 - 353560324349.8
rna polymerase sigma factor rpoeBFF50_18860Not AvailableNegative3535636 - 353621121697.0
hypothetical proteinBFF50_18865Not AvailableNegative3536208 - 35363636229.83
trna (adenosine(37)-n6)-methyltransferase trmmBFF50_18875Not AvailableNegative3538225 - 353896227331.5
atp-dependent rna helicase srmbBFF50_18880Not AvailablePositive3539094 - 354042849901.0
duf3521 domain-containing proteinBFF50_18885Not AvailablePositive3540434 - 35406226976.69
lysr family transcriptional regulatorBFF50_18890Not AvailableNegative3540637 - 354151833285.3
amino acid transporterBFF50_18895Not AvailablePositive3541621 - 354220821335.7
autonomous glycyl radical cofactor grcaBFF50_18900Not AvailableNegative3542262 - 354264514269.0
uracil-dna glycosylaseBFF50_18905Not AvailablePositive3542949 - 354363825682.6

Displaying genes 3251 – 3260 of 4969 in total

Pathways

0 pathways

No pathways found

No metabolic pathways have been associated with this bacterium yet.

Metabolites

0 records
Metabolite IDMetabolite nameStructureCAS number
No metabolites foundTry different search terms or mass values.

Displaying 0 metabolites

Health Effects

No health effects information available for this bacterium.