Escherichia coli strain HE-MDREc68

Gram-negativeRodMotileFacultative anaerobe

Kingdom

Pseudomonadati

Phylum

Pseudomonadota

Class

Gammaproteobacteria

Order

Enterobacterales

Family

Enterobacteriaceae

Genus

Escherichia

Description

Escherichia coli strain HE-MDREc68 is a Gram-negative, rod-shaped bacterium that is facultatively anaerobic and exhibits mobility due to the presence of flagella. This strain is primarily associated with various hosts, including humans (Homo sapiens), domestic animals like chickens (Gallus gallus) and cattle (Bos taurus), as well as numerous other vertebrates and invertebrates. It has been identified in a range of environments, primarily in host-associated habitats, indicating its adaptability and potential for transmission across species. The optimal growth temperature for HE-MDREc68 is 37°C, placing it within the mesophilic temperature range. This strain has a single replicon and possesses a double membrane structure, characteristic of Gram-negative bacteria. HE-MDREc68 is known to be pathogenic to humans, being associated with a variety of health issues including urinary tract infections (UTIs), gastrointestinal infections, and severe conditions such as septicemia and hemolytic uremic syndrome (HUS). Its pathogenic potential is underscored by its ability to cause diseases ranging from mild diarrhea to severe neonatal meningitis and even colorectal cancer. The wide array of hosts and the serious health effects linked to HE-MDREc68 suggest an ecological versatility that enhances its survival and spread. This adaptability may facilitate its role as both a free-living organism and a pathogenic agent, illustrating the complex interactions between microbial life and host organisms in various environments. Understanding such strains is crucial for developing effective public health strategies and interventions.

Taxonomy

KingdomPseudomonadati
PhylumPseudomonadota
ClassGammaproteobacteria
OrderEnterobacterales
FamilyEnterobacteriaceae
GenusEscherichia
SpeciesEscherichia coli
Strainstrain HE-MDREc68

Profile

Physiology
Gram staining propertiesNegative
ShapeRod
MobilityYes
Flagellar presenceYes
Number of membranes2
Image of Escherichia coli strain HE-MDREc68
Image source: Wikipedia/Wikimedia
Ecology, Host, and Life Cycle
Oxygen requirementsFacultative anaerobe
Optimal temperature37
Temperature rangeMesophilic
HabitatHostAssociated
Biotic relationshipFree living
Host(s)Homo sapiens, Gallus gallus, Bos taurus
Cell arrangementPairs - Singles
SporulationNot Available
Energy sourceNot Available
PathogenicityHuman

Genome Summary

Escherichia coli strain HE-MDREc68


Gene Summary

Adenine Count

1298782 bp

Thymine Count

1296084 bp

Guanine Count

1339906 bp

Cytosine Count

1340345 bp

Genome Length

5275450 bp

Protein-coding Genes

4781 genes

Non-Coding Genes

471 genes

# of Chromosomes/Plasmids

1

Genes

NameLocus TagUniProt IDStrand OrientationGene Start/EndProtein Molecular Weight
Phi92_gp150BFD68_01670Not AvailablePositive373172 - 37456651111.5
Utp-glucose-1-phosphate uridylyltransferaseBFD68_01675Not AvailablePositive374741 - 37563432799.2
Phi92_gp067BFD68_01680Not AvailablePositive376007 - 37709240704.5
Phi92_gp064BFD68_01685Not AvailablePositive377092 - 37799132648.8
Phi92_gp066BFD68_01690Not AvailablePositive378049 - 37892732483.2
Phi92_gp065BFD68_01695Not AvailablePositive378932 - 37947420645.6
o-unit flippaseBFD68_01700Not AvailablePositive379476 - 38073546965.3
rhamnosyl transferaseBFD68_01705Not AvailablePositive380740 - 38170537109.6
Transposase is1BFD68_01710Not AvailablePositive382072 - 3822636817.08
Transposase is1BFD68_01715Not AvailablePositive382317 - 3825177232.62

Displaying genes 1 – 10 of 5252 in total

Pathways

0 pathways

No pathways found

No metabolic pathways have been associated with this bacterium yet.

Metabolites

0 records
Metabolite IDMetabolite nameStructureCAS number
No metabolites foundTry different search terms or mass values.

Displaying 0 metabolites

Health Effects

Health ConditionRelationReference
Gi diseaseCausesPMC11149725
UtisCausesPMC11434687
Colorectal cancerCausesPMC12198655
Pyogenic liver abscessesCausesPMC12392612
UtiCausesPMC13014981
ColibacillosisCausesPMC13255289
Enteric infectionsCausesPMC13255289
Foodborne infectionsCausesPMC13255289
Clinical mastitisCausesPMC13293316
DiarrheaCausesPMC3035056

Displaying health effects 1 – 10 of 74 in total