Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Gammaproteobacteria
Order
Enterobacterales
Family
Enterobacteriaceae
Genus
Escherichia
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Gammaproteobacteria |
| Order | Enterobacterales |
| Family | Enterobacteriaceae |
| Genus | Escherichia |
| Species | Escherichia coli |
| Strain | strain HE-MDREc68 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Negative |
| Shape | Rod |
| Mobility | Yes |
| Flagellar presence | Yes |
| Number of membranes | 2 |

Image source: Wikipedia/Wikimedia
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Facultative anaerobe |
| Optimal temperature | 37 |
| Temperature range | Mesophilic |
| Habitat | HostAssociated |
| Biotic relationship | Free living |
| Host(s) | Homo sapiens, Gallus gallus, Bos taurus |
| Cell arrangement | Pairs - Singles |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Human |
Gene Summary
Adenine Count
1298782 bp
Thymine Count
1296084 bp
Guanine Count
1339906 bp
Cytosine Count
1340345 bp
Genome Length
5275450 bp
Protein-coding Genes
4781 genes
Non-Coding Genes
471 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| signal transduction protein pmrd | BFD68_00565 | Not Available | Positive | 118411 - 118677 | 9858.05 |
| 4-amino-4-deoxy-l-arabinose-phospho-udp flippase | BFD68_00570 | Not Available | Negative | 118671 - 119057 | 14058.0 |
| 4-amino-4-deoxy-l-arabinose-phospho-udp flippase | BFD68_00575 | Not Available | Negative | 119057 - 119392 | 12166.6 |
| 4-amino-4-deoxy-l-arabinose lipid a transferase | BFD68_00580 | Not Available | Negative | 119389 - 121041 | 62500.9 |
| 4-deoxy-4-formamido-l-arabinose- phosphoundecaprenol deformylase | BFD68_00585 | Not Available | Negative | 121041 - 121931 | 33023.5 |
| bifunctional udp-glucuronic acid oxidase/udp-4-amino-4-deoxy-l-arabinose formyltransferase | BFD68_00590 | Not Available | Negative | 121928 - 123910 | 74334.2 |
| undecaprenyl-phosphate 4-deoxy-4-formamido-l-arabinose transferase | BFD68_00595 | Not Available | Negative | 123910 - 124878 | 36222.2 |
| Ncrna_class:antisense_rna | Not Available | Not Available | Positive | 125390 - 125497 | Not Available |
| udp-4-amino-4-deoxy-l-arabinose--oxoglutarate aminotransferase | BFD68_00600 | Not Available | Negative | 124882 - 126021 | 41623.2 |
| histidine phosphatase family protein | BFD68_00605 | Not Available | Positive | 126329 - 126931 | 22394.9 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
| Health Condition | Relation | Reference |
|---|---|---|
| Gi disease | Causes | PMC11149725 |
| Utis | Causes | PMC11434687 |
| Colorectal cancer | Causes | PMC12198655 |
| Pyogenic liver abscesses | Causes | PMC12392612 |
| Uti | Causes | PMC13014981 |
| Colibacillosis | Causes | PMC13255289 |
| Enteric infections | Causes | PMC13255289 |
| Foodborne infections | Causes | PMC13255289 |
| Clinical mastitis | Causes | PMC13293316 |
| Diarrhea | Causes | PMC3035056 |





