Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Gammaproteobacteria
Order
Enterobacterales
Family
Enterobacteriaceae
Genus
Escherichia
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Gammaproteobacteria |
| Order | Enterobacterales |
| Family | Enterobacteriaceae |
| Genus | Escherichia |
| Species | Escherichia coli |
| Strain | strain HE-MDREc68 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Negative |
| Shape | Rod |
| Mobility | Yes |
| Flagellar presence | Yes |
| Number of membranes | 2 |

Image source: Wikipedia/Wikimedia
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Facultative anaerobe |
| Optimal temperature | 37 |
| Temperature range | Mesophilic |
| Habitat | HostAssociated |
| Biotic relationship | Free living |
| Host(s) | Homo sapiens, Gallus gallus, Bos taurus |
| Cell arrangement | Pairs - Singles |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Human |
Gene Summary
Adenine Count
1298782 bp
Thymine Count
1296084 bp
Guanine Count
1339906 bp
Cytosine Count
1340345 bp
Genome Length
5275450 bp
Protein-coding Genes
4781 genes
Non-Coding Genes
471 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| hypothetical protein | BFD68_16005 | Not Available | Negative | 5186917 - 5187843 | 35028.0 |
| 2,5-didehydrogluconate reductase a | BFD68_16010 | Not Available | Negative | 5188043 - 5188870 | 31139.4 |
| aldehyde reductase | BFD68_16015 | Not Available | Negative | 5188975 - 5190138 | 42089.4 |
| hypothetical protein | BFD68_16020 | Not Available | Positive | 5190189 - 5190335 | 5509.88 |
| arac family transcriptional regulator | BFD68_16025 | Not Available | Positive | 5190332 - 5191231 | 33817.1 |
| hypothetical protein | BFD68_16030 | Not Available | Negative | 5191271 - 5191930 | 24135.3 |
| cystathionine beta-lyase | BFD68_16035 | Not Available | Negative | 5192070 - 5193257 | 43200.8 |
| hypothetical protein | BFD68_16040 | Not Available | Positive | 5193379 - 5193516 | 5304.43 |
| tonb-system energizer exbb | BFD68_16045 | Not Available | Positive | 5193509 - 5194243 | 26289.0 |
| tonb system transport protein exbd | BFD68_16050 | Not Available | Positive | 5194250 - 5194675 | 15527.9 |
Pathways
1297 pathways
Health Effects
| Health Condition | Relation | Reference |
|---|---|---|
| Gi disease | Causes | PMC11149725 |
| Utis | Causes | PMC11434687 |
| Colorectal cancer | Causes | PMC12198655 |
| Pyogenic liver abscesses | Causes | PMC12392612 |
| Uti | Causes | PMC13014981 |
| Colibacillosis | Causes | PMC13255289 |
| Enteric infections | Causes | PMC13255289 |
| Foodborne infections | Causes | PMC13255289 |
| Clinical mastitis | Causes | PMC13293316 |
| Diarrhea | Causes | PMC3035056 |





