Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Gammaproteobacteria
Order
Enterobacterales
Family
Enterobacteriaceae
Genus
Escherichia
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Gammaproteobacteria |
| Order | Enterobacterales |
| Family | Enterobacteriaceae |
| Genus | Escherichia |
| Species | Escherichia coli |
| Strain | strain HE-MDREc68 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Negative |
| Shape | Rod |
| Mobility | Yes |
| Flagellar presence | Yes |
| Number of membranes | 2 |

Image source: Wikipedia/Wikimedia
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Facultative anaerobe |
| Optimal temperature | 37 |
| Temperature range | Mesophilic |
| Habitat | HostAssociated |
| Biotic relationship | Free living |
| Host(s) | Homo sapiens, Gallus gallus, Bos taurus |
| Cell arrangement | Pairs - Singles |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Human |
Gene Summary
Adenine Count
1298782 bp
Thymine Count
1296084 bp
Guanine Count
1339906 bp
Cytosine Count
1340345 bp
Genome Length
5275450 bp
Protein-coding Genes
4781 genes
Non-Coding Genes
471 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| lysine decarboxylase ldcc | BFD68_08390 | Not Available | Negative | 3579351 - 3581498 | 81250.7 |
| lysine:cadaverine antiporter | BFD68_08395 | Not Available | Negative | 3581578 - 3582912 | 46667.8 |
| transcriptional regulator cadc | BFD68_08400 | Not Available | Negative | 3583278 - 3584816 | 57876.2 |
| Trna-phe | Not Available | Not Available | Positive | 3585433 - 3585508 | Not Available |
| transcriptional regulator | BFD68_08410 | Not Available | Negative | 3585615 - 3586190 | 21932.3 |
| protein-disulfide reductase dsbd | BFD68_08415 | Not Available | Negative | 3586227 - 3587924 | 61850.7 |
| cation tolerance protein cuta | BFD68_08420 | Not Available | Negative | 3587900 - 3588238 | 12361.8 |
| c4-dicarboxylate transporter | BFD68_08425 | Not Available | Negative | 3588354 - 3589655 | 45753.5 |
| aspartate ammonia-lyase | BFD68_08430 | Not Available | Negative | 3589773 - 3591209 | 52359.2 |
| membrane protein fxsa | BFD68_08435 | Not Available | Positive | 3591546 - 3592022 | 17679.1 |
Pathways
1297 pathways
Health Effects
| Health Condition | Relation | Reference |
|---|---|---|
| Gi disease | Causes | PMC11149725 |
| Utis | Causes | PMC11434687 |
| Colorectal cancer | Causes | PMC12198655 |
| Pyogenic liver abscesses | Causes | PMC12392612 |
| Uti | Causes | PMC13014981 |
| Colibacillosis | Causes | PMC13255289 |
| Enteric infections | Causes | PMC13255289 |
| Foodborne infections | Causes | PMC13255289 |
| Clinical mastitis | Causes | PMC13293316 |
| Diarrhea | Causes | PMC3035056 |





