Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Gammaproteobacteria
Order
Enterobacterales
Family
Enterobacteriaceae
Genus
Escherichia
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Gammaproteobacteria |
| Order | Enterobacterales |
| Family | Enterobacteriaceae |
| Genus | Escherichia |
| Species | Escherichia coli |
| Strain | strain HE-MDREc68 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Negative |
| Shape | Rod |
| Mobility | Yes |
| Flagellar presence | Yes |
| Number of membranes | 2 |

Image source: Wikipedia/Wikimedia
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Facultative anaerobe |
| Optimal temperature | 37 |
| Temperature range | Mesophilic |
| Habitat | HostAssociated |
| Biotic relationship | Free living |
| Host(s) | Homo sapiens, Gallus gallus, Bos taurus |
| Cell arrangement | Pairs - Singles |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Human |
Gene Summary
Adenine Count
1298782 bp
Thymine Count
1296084 bp
Guanine Count
1339906 bp
Cytosine Count
1340345 bp
Genome Length
5275450 bp
Protein-coding Genes
4781 genes
Non-Coding Genes
471 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| thioredoxin-disulfide reductase | BFD68_05825 | Not Available | Positive | 2500011 - 2500976 | 34599.1 |
| cysteine/glutathione abc transporter permease/atp-binding protein cydd | BFD68_05830 | Not Available | Positive | 2501099 - 2502865 | 65096.0 |
| cysteine/glutathione abc transporter atp-binding protein/permease cydc | BFD68_05835 | Not Available | Positive | 2502866 - 2504587 | 62929.3 |
| leucyl/phenylalanyl-trna--protein transferase | BFD68_05840 | Not Available | Positive | 2504629 - 2505333 | 26695.1 |
| translation initiation factor if-1 | BFD68_05845 | Not Available | Positive | 2505618 - 2505836 | 8250.1 |
| Trna-ser | Not Available | Not Available | Positive | 2506032 - 2506119 | Not Available |
| atp-dependent clp protease atp-binding subunit clpa | BFD68_05855 | Not Available | Negative | 2506463 - 2508739 | 84211.9 |
| atp-dependent clp protease adapter clps | BFD68_05860 | Not Available | Negative | 2508770 - 2509090 | 12179.7 |
| cold shock domain protein cspd | BFD68_05865 | Not Available | Positive | 2509413 - 2509637 | 7969.41 |
| proq/fino family protein | BFD68_23360 | Not Available | Positive | 2512520 - 2513122 | 22570.1 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
| Health Condition | Relation | Reference |
|---|---|---|
| Gi disease | Causes | PMC11149725 |
| Utis | Causes | PMC11434687 |
| Colorectal cancer | Causes | PMC12198655 |
| Pyogenic liver abscesses | Causes | PMC12392612 |
| Uti | Causes | PMC13014981 |
| Colibacillosis | Causes | PMC13255289 |
| Enteric infections | Causes | PMC13255289 |
| Foodborne infections | Causes | PMC13255289 |
| Clinical mastitis | Causes | PMC13293316 |
| Diarrhea | Causes | PMC3035056 |





