Hydrogenophaga sp. H7

rod

Kingdom

Pseudomonadati

Phylum

Pseudomonadota

Class

Betaproteobacteria

Order

Burkholderiales

Family

Comamonadaceae

Genus

Hydrogenophaga

Description

Hydrogenophaga sp. H7 is a Gram-negative bacterium characterized by its rod-shaped morphology. This species is found in soil environments, highlighting its ecological role in terrestrial ecosystems. The presence of Hydrogenophaga sp. H7 in soil suggests its potential involvement in various biogeochemical processes, including nutrient cycling. The genome of Hydrogenophaga sp. H7 is notable for containing a single replicon, which is a feature that can influence the organism's genetic stability and replication processes. The accession number for this particular strain is MCIC00000000.1, which provides a reference for researchers interested in the genetic and functional studies of this bacterium. In summary, Hydrogenophaga sp. H7 exemplifies a soil-dwelling, Gram-negative rod that may contribute to the ecological dynamics within its habitat. Its single replicon may also indicate specific evolutionary adaptations to its environment, further emphasizing the importance of studying microbial diversity in soil ecosystems.

Taxonomy

KingdomPseudomonadati
PhylumPseudomonadota
ClassBetaproteobacteria
OrderBurkholderiales
FamilyComamonadaceae
GenusHydrogenophaga
SpeciesHydrogenophaga sp. H7
StrainNo strain

Profile

Physiology
Gram staining propertiesGram-negative
Shaperod
MobilityNot Available
Flagellar presenceNot Available
Number of membranesNot Available
Ecology, Host, and Life Cycle
Oxygen requirementsNot Available
Optimal temperatureNot Available
Temperature rangeNot Available
Habitatsoil
Biotic relationshipNot Available
Host(s)Not Available
Cell arrangementNot Available
SporulationNot Available
Energy sourceNot Available
PathogenicityNot Available

Genome Summary

Hydrogenophaga sp. H7 H7_scaffold9, whole genome shotgun sequence.

Gene Summary

Adenine Count

736432 bp

Thymine Count

743515 bp

Guanine Count

1523558 bp

Cytosine Count

1495809 bp

Genome Length

4499315 bp

Protein-coding Genes

4211 genes

Non-Coding Genes

63 genes

# of Chromosomes/Plasmids

1

Genes

NameLocus TagUniProt IDStrand OrientationGene Start/EndProtein Molecular Weight
short-chain dehydrogenaseBC358_17235Not AvailablePositive4111670 - 411245227477.1
transporterBC358_17240Not AvailablePositive4112481 - 411339532027.5
thioesteraseBC358_17245Not AvailablePositive4113414 - 411386316725.2
alkylhydroperoxidaseBC358_17250Not AvailableNegative4113950 - 411453721660.1
4-carboxymuconolactone decarboxylaseBC358_17255Not AvailablePositive4114619 - 411499613698.4
twin-arginine translocation pathway signalBC358_17260Not AvailablePositive4115066 - 411604934048.2
helix-turn-helix transcriptional regulatorBC358_17265Not AvailableNegative4116063 - 411662320769.0
succinyl-coa--3-ketoacid-coa transferaseBC358_17270Not AvailablePositive4116733 - 411743425194.4
succinyl-coa--3-ketoacid-coa transferaseBC358_17275Not AvailablePositive4117446 - 411808422565.6
Trna-glyNot AvailableNot AvailablePositive4118147 - 4118220Not Available

Displaying genes 3911 – 3920 of 4274 in total

Pathways

0 pathways

No pathways found

No metabolic pathways have been associated with this bacterium yet.

Metabolites

0 records
Metabolite IDMetabolite nameStructureCAS number
No metabolites foundTry different search terms or mass values.

Displaying 0 metabolites

Health Effects

No health effects information available for this bacterium.