Hydrogenophaga sp. H7

rod

Kingdom

Pseudomonadati

Phylum

Pseudomonadota

Class

Betaproteobacteria

Order

Burkholderiales

Family

Comamonadaceae

Genus

Hydrogenophaga

Description

Hydrogenophaga sp. H7 is a Gram-negative bacterium characterized by its rod-shaped morphology. This species is found in soil environments, highlighting its ecological role in terrestrial ecosystems. The presence of Hydrogenophaga sp. H7 in soil suggests its potential involvement in various biogeochemical processes, including nutrient cycling. The genome of Hydrogenophaga sp. H7 is notable for containing a single replicon, which is a feature that can influence the organism's genetic stability and replication processes. The accession number for this particular strain is MCIC00000000.1, which provides a reference for researchers interested in the genetic and functional studies of this bacterium. In summary, Hydrogenophaga sp. H7 exemplifies a soil-dwelling, Gram-negative rod that may contribute to the ecological dynamics within its habitat. Its single replicon may also indicate specific evolutionary adaptations to its environment, further emphasizing the importance of studying microbial diversity in soil ecosystems.

Taxonomy

KingdomPseudomonadati
PhylumPseudomonadota
ClassBetaproteobacteria
OrderBurkholderiales
FamilyComamonadaceae
GenusHydrogenophaga
SpeciesHydrogenophaga sp. H7
StrainNo strain

Profile

Physiology
Gram staining propertiesGram-negative
Shaperod
MobilityNot Available
Flagellar presenceNot Available
Number of membranesNot Available
Ecology, Host, and Life Cycle
Oxygen requirementsNot Available
Optimal temperatureNot Available
Temperature rangeNot Available
Habitatsoil
Biotic relationshipNot Available
Host(s)Not Available
Cell arrangementNot Available
SporulationNot Available
Energy sourceNot Available
PathogenicityNot Available

Genome Summary

Hydrogenophaga sp. H7 H7_scaffold9, whole genome shotgun sequence.

Gene Summary

Adenine Count

736432 bp

Thymine Count

743515 bp

Guanine Count

1523558 bp

Cytosine Count

1495809 bp

Genome Length

4499315 bp

Protein-coding Genes

4211 genes

Non-Coding Genes

63 genes

# of Chromosomes/Plasmids

1

Genes

NameLocus TagUniProt IDStrand OrientationGene Start/EndProtein Molecular Weight
shikimate dehydrogenaseBC358_17135Not AvailableNegative4086475 - 408729628410.2
disulfide bond formation protein dsbaBC358_17140Not AvailablePositive4087374 - 408803023987.2
deoxyribodipyrimidine photolyaseBC358_17145Not AvailableNegative4088040 - 408959658385.8
duf2256 domain-containing proteinBC358_17150Not AvailableNegative4089589 - 40897566220.52
radical sam proteinBC358_17155Not AvailableNegative4089804 - 409173271197.4
l-serine ammonia-lyaseBC358_17160Not AvailableNegative4091776 - 409316449012.1
d-amino acid dehydrogenaseBC358_17165Not AvailableNegative4093181 - 409443445485.3
abc transporter substrate-binding proteinBC358_17170Not AvailableNegative4094717 - 409571535346.9
amidohydrolaseBC358_17175Not AvailableNegative4095739 - 409691141513.6
lysr family transcriptional regulatorBC358_17180Not AvailablePositive4097018 - 409791432108.3

Displaying genes 3891 – 3900 of 4274 in total

Pathways

0 pathways

No pathways found

No metabolic pathways have been associated with this bacterium yet.

Metabolites

0 records
Metabolite IDMetabolite nameStructureCAS number
No metabolites foundTry different search terms or mass values.

Displaying 0 metabolites

Health Effects

No health effects information available for this bacterium.