Hydrogenophaga sp. H7

rod

Kingdom

Pseudomonadati

Phylum

Pseudomonadota

Class

Betaproteobacteria

Order

Burkholderiales

Family

Comamonadaceae

Genus

Hydrogenophaga

Description

Hydrogenophaga sp. H7 is a Gram-negative bacterium characterized by its rod-shaped morphology. This species is found in soil environments, highlighting its ecological role in terrestrial ecosystems. The presence of Hydrogenophaga sp. H7 in soil suggests its potential involvement in various biogeochemical processes, including nutrient cycling. The genome of Hydrogenophaga sp. H7 is notable for containing a single replicon, which is a feature that can influence the organism's genetic stability and replication processes. The accession number for this particular strain is MCIC00000000.1, which provides a reference for researchers interested in the genetic and functional studies of this bacterium. In summary, Hydrogenophaga sp. H7 exemplifies a soil-dwelling, Gram-negative rod that may contribute to the ecological dynamics within its habitat. Its single replicon may also indicate specific evolutionary adaptations to its environment, further emphasizing the importance of studying microbial diversity in soil ecosystems.

Taxonomy

KingdomPseudomonadati
PhylumPseudomonadota
ClassBetaproteobacteria
OrderBurkholderiales
FamilyComamonadaceae
GenusHydrogenophaga
SpeciesHydrogenophaga sp. H7
StrainNo strain

Profile

Physiology
Gram staining propertiesGram-negative
Shaperod
MobilityNot Available
Flagellar presenceNot Available
Number of membranesNot Available
Ecology, Host, and Life Cycle
Oxygen requirementsNot Available
Optimal temperatureNot Available
Temperature rangeNot Available
Habitatsoil
Biotic relationshipNot Available
Host(s)Not Available
Cell arrangementNot Available
SporulationNot Available
Energy sourceNot Available
PathogenicityNot Available

Genome Summary

Hydrogenophaga sp. H7 H7_scaffold9, whole genome shotgun sequence.

Gene Summary

Adenine Count

736432 bp

Thymine Count

743515 bp

Guanine Count

1523558 bp

Cytosine Count

1495809 bp

Genome Length

4499315 bp

Protein-coding Genes

4211 genes

Non-Coding Genes

63 genes

# of Chromosomes/Plasmids

1

Genes

NameLocus TagUniProt IDStrand OrientationGene Start/EndProtein Molecular Weight
pas domain-containing sensor histidine kinaseBC358_12640Not AvailablePositive3189299 - 319064548926.8
hypothetical proteinBC358_12645Not AvailablePositive3190671 - 319142927100.7
penicillin-binding protein 2BC358_12650Not AvailableNegative3191434 - 319338371788.5
rod shape-determining protein mredBC358_12655Not AvailableNegative3193385 - 319391519587.4
rod shape-determining protein mrecBC358_12660Not AvailableNegative3193912 - 319485933570.5
rod shape-determining proteinBC358_12665Not AvailableNegative3194902 - 319594536923.1
asparaginyl/glutamyl-trna amidotransferase subunit cBC358_12670Not AvailablePositive3196212 - 319651110901.2
aspartyl/glutamyl-trna amidotransferase subunit aBC358_12675Not AvailablePositive3196508 - 319800452592.3
aspartyl/glutamyl-trna amidotransferase subunit bBC358_12680Not AvailablePositive3198007 - 319946753124.3
duf4124 domain-containing proteinBC358_12685Not AvailableNegative3199604 - 320020923547.1

Displaying genes 3001 – 3010 of 4274 in total

Pathways

0 pathways

No pathways found

No metabolic pathways have been associated with this bacterium yet.

Metabolites

0 records
Metabolite IDMetabolite nameStructureCAS number
No metabolites foundTry different search terms or mass values.

Displaying 0 metabolites

Health Effects

No health effects information available for this bacterium.