Hydrogenophaga sp. H7

rod

Kingdom

Pseudomonadati

Phylum

Pseudomonadota

Class

Betaproteobacteria

Order

Burkholderiales

Family

Comamonadaceae

Genus

Hydrogenophaga

Description

Hydrogenophaga sp. H7 is a Gram-negative bacterium characterized by its rod-shaped morphology. This species is found in soil environments, highlighting its ecological role in terrestrial ecosystems. The presence of Hydrogenophaga sp. H7 in soil suggests its potential involvement in various biogeochemical processes, including nutrient cycling. The genome of Hydrogenophaga sp. H7 is notable for containing a single replicon, which is a feature that can influence the organism's genetic stability and replication processes. The accession number for this particular strain is MCIC00000000.1, which provides a reference for researchers interested in the genetic and functional studies of this bacterium. In summary, Hydrogenophaga sp. H7 exemplifies a soil-dwelling, Gram-negative rod that may contribute to the ecological dynamics within its habitat. Its single replicon may also indicate specific evolutionary adaptations to its environment, further emphasizing the importance of studying microbial diversity in soil ecosystems.

Taxonomy

KingdomPseudomonadati
PhylumPseudomonadota
ClassBetaproteobacteria
OrderBurkholderiales
FamilyComamonadaceae
GenusHydrogenophaga
SpeciesHydrogenophaga sp. H7
StrainNo strain

Profile

Physiology
Gram staining propertiesGram-negative
Shaperod
MobilityNot Available
Flagellar presenceNot Available
Number of membranesNot Available
Ecology, Host, and Life Cycle
Oxygen requirementsNot Available
Optimal temperatureNot Available
Temperature rangeNot Available
Habitatsoil
Biotic relationshipNot Available
Host(s)Not Available
Cell arrangementNot Available
SporulationNot Available
Energy sourceNot Available
PathogenicityNot Available

Genome Summary

Hydrogenophaga sp. H7 H7_scaffold9, whole genome shotgun sequence.

Gene Summary

Adenine Count

736432 bp

Thymine Count

743515 bp

Guanine Count

1523558 bp

Cytosine Count

1495809 bp

Genome Length

4499315 bp

Protein-coding Genes

4211 genes

Non-Coding Genes

63 genes

# of Chromosomes/Plasmids

1

Genes

NameLocus TagUniProt IDStrand OrientationGene Start/EndProtein Molecular Weight
taurine dioxygenaseBC358_03985Not AvailablePositive1368069 - 136891731892.8
transposaseBC358_03990Not AvailablePositive1368963 - 137002138933.7
abc transporter substrate-binding proteinBC358_03995Not AvailablePositive1370076 - 137107735398.0
carboxymuconolactone decarboxylaseBC358_04000Not AvailablePositive1371085 - 137150115104.1
isoquinoline 1-oxidoreductaseBC358_04005Not AvailableNegative1371488 - 137363275276.4
(2fe-2s)-binding proteinBC358_04010Not AvailableNegative1373635 - 137409915950.3
heat-shock proteinBC358_04015Not AvailablePositive1374284 - 137554945911.8
xylose isomeraseBC358_04020Not AvailableNegative1375558 - 137646933183.2
4-hydroxyphenylpyruvate dioxygenaseBC358_04025Not AvailableNegative1376473 - 137739333560.1
c4-dicarboxylate abc transporter permeaseBC358_04030Not AvailableNegative1377422 - 137891552024.9

Displaying genes 1291 – 1300 of 4274 in total

Pathways

0 pathways

No pathways found

No metabolic pathways have been associated with this bacterium yet.

Metabolites

0 records
Metabolite IDMetabolite nameStructureCAS number
No metabolites foundTry different search terms or mass values.

Displaying 0 metabolites

Health Effects

No health effects information available for this bacterium.