Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Gammaproteobacteria
Order
Vibrionales
Family
Vibrionaceae
Genus
Photobacterium
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Gammaproteobacteria |
| Order | Vibrionales |
| Family | Vibrionaceae |
| Genus | Photobacterium |
| Species | Photobacterium damselae |
| Strain | subsp. piscicida strain L091106-03H |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Negative |
| Shape | Coccus |
| Mobility | Yes |
| Flagellar presence | Yes |
| Number of membranes | Not Available |

AI-generated image based on bacteria physiology
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Not Available |
| Optimal temperature | Not Available |
| Temperature range | mesophilic |
| Habitat | Italian aquaculture; Marine |
| Biotic relationship | Not Available |
| Host(s) | Homo sapiens, Alca torda |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Genome Summary
Photobacterium damselae subsp. piscicida strain L091106-03H
Gene Summary
Adenine Count
1223455 bp
Thymine Count
1223852 bp
Guanine Count
848705 bp
Cytosine Count
842999 bp
Genome Length
4324838 bp
Protein-coding Genes
3464 genes
Non-Coding Genes
100 genes
# of Chromosomes/Plasmids
3
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| dtmp kinase | BEI67_04835 | Not Available | Positive | 999369 - 999998 | 23093.6 |
| dna polymerase iii subunit delta' | BEI67_04840 | Not Available | Positive | 999999 - 1000961 | 35799.2 |
| group ii intron reverse transcriptase/maturase | BEI67_04850 | Not Available | Positive | 1002595 - 1003511 | 35971.8 |
| pts mannose transporter subunit iib | BEI67_04855 | Not Available | Positive | 1004039 - 1005664 | 57825.2 |
| hypothetical protein | BEI67_04860 | Not Available | Positive | 1005664 - 1006131 | 17564.1 |
| transposase | BEI67_04865 | Not Available | Negative | 1006421 - 1006696 | 10458.7 |
| dna transformation protein | BEI67_04870 | Not Available | Positive | 1007325 - 1007915 | 22381.2 |
| colanic acid biosynthesis glycosyltransferase wcaa | BEI67_04875 | Not Available | Positive | 1008019 - 1008951 | 35120.1 |
| lactate dehydrogenase | BEI67_04880 | Not Available | Negative | 1008974 - 1009969 | 37162.5 |
| hypothetical protein | BEI67_04885 | Not Available | Negative | 1010130 - 1010630 | 18621.2 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.

