Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Gammaproteobacteria
Order
Vibrionales
Family
Vibrionaceae
Genus
Photobacterium
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Gammaproteobacteria |
| Order | Vibrionales |
| Family | Vibrionaceae |
| Genus | Photobacterium |
| Species | Photobacterium damselae |
| Strain | subsp. piscicida strain L091106-03H |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Negative |
| Shape | Coccus |
| Mobility | Yes |
| Flagellar presence | Yes |
| Number of membranes | Not Available |

AI-generated image based on bacteria physiology
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Not Available |
| Optimal temperature | Not Available |
| Temperature range | mesophilic |
| Habitat | Italian aquaculture; Marine |
| Biotic relationship | Not Available |
| Host(s) | Homo sapiens, Alca torda |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Genome Summary
Photobacterium damselae subsp. piscicida strain L091106-03H
Gene Summary
Adenine Count
1223455 bp
Thymine Count
1223852 bp
Guanine Count
848705 bp
Cytosine Count
842999 bp
Genome Length
4324838 bp
Protein-coding Genes
3464 genes
Non-Coding Genes
100 genes
# of Chromosomes/Plasmids
3
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| transposase | BEI67_04550 | Not Available | Positive | 933655 - 933930 | 10458.7 |
| adenylosuccinate lyase | BEI67_04570 | Not Available | Negative | 937760 - 939127 | 51294.3 |
| lysogenization regulator hfld | BEI67_04575 | Not Available | Negative | 939210 - 939830 | 22860.0 |
| trna 2-thiouridine(34) synthase mnma | BEI67_04580 | Not Available | Negative | 939846 - 940958 | 41506.2 |
| 23s rrna pseudouridylate synthase | BEI67_04585 | Not Available | Negative | 941234 - 941881 | 24678.8 |
| nadp-dependent isocitrate dehydrogenase | BEI67_04590 | Not Available | Positive | 942024 - 943277 | 45718.9 |
| cold shock domain protein cspd | BEI67_04595 | Not Available | Negative | 943703 - 943924 | 8084.45 |
| atp-dependent clp protease adapter clps | BEI67_04600 | Not Available | Positive | 944182 - 944502 | 12245.8 |
| atp-dependent clp protease atp-binding subunit clpa | BEI67_04605 | Not Available | Positive | 944547 - 946811 | 83637.1 |
| translation initiation factor if-1 | BEI67_04610 | Not Available | Negative | 946944 - 947162 | 8219.13 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.

