Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Gammaproteobacteria
Order
Vibrionales
Family
Vibrionaceae
Genus
Photobacterium
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Gammaproteobacteria |
| Order | Vibrionales |
| Family | Vibrionaceae |
| Genus | Photobacterium |
| Species | Photobacterium damselae |
| Strain | subsp. piscicida strain L091106-03H |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Negative |
| Shape | Coccus |
| Mobility | Yes |
| Flagellar presence | Yes |
| Number of membranes | Not Available |

AI-generated image based on bacteria physiology
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Not Available |
| Optimal temperature | Not Available |
| Temperature range | mesophilic |
| Habitat | Italian aquaculture; Marine |
| Biotic relationship | Not Available |
| Host(s) | Homo sapiens, Alca torda |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Genome Summary
Photobacterium damselae subsp. piscicida strain L091106-03H
Gene Summary
Adenine Count
1223455 bp
Thymine Count
1223852 bp
Guanine Count
848705 bp
Cytosine Count
842999 bp
Genome Length
4324838 bp
Protein-coding Genes
3464 genes
Non-Coding Genes
100 genes
# of Chromosomes/Plasmids
3
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| atp-dependent clp endopeptidase, proteolytic subunit clpp | BEI67_03960 | Not Available | Positive | 808480 - 809103 | 22932.6 |
| atp-dependent protease atp-binding subunit clpx | BEI67_03965 | Not Available | Positive | 809216 - 810505 | 47030.3 |
| endopeptidase la | BEI67_03970 | Not Available | Positive | 810722 - 813085 | 87790.5 |
| dna-binding protein hu | BEI67_03975 | Not Available | Positive | 813286 - 813558 | 9362.11 |
| peptidylprolyl isomerase | BEI67_03980 | Not Available | Positive | 813909 - 815807 | 70266.7 |
| transporter | BEI67_03985 | Not Available | Positive | 815971 - 816258 | 10432.7 |
| cytoplasmic protein | BEI67_04000 | Not Available | Negative | 817012 - 817350 | 12714.9 |
| rhombosortase | BEI67_04005 | Not Available | Negative | 817437 - 817994 | 20285.9 |
| dtw domain-containing protein | BEI67_04010 | Not Available | Positive | 818004 - 818621 | 23144.8 |
| hypothetical protein | BEI67_04015 | Not Available | Negative | 818666 - 818845 | 7211.33 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.

