Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Gammaproteobacteria
Order
Vibrionales
Family
Vibrionaceae
Genus
Photobacterium
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Gammaproteobacteria |
| Order | Vibrionales |
| Family | Vibrionaceae |
| Genus | Photobacterium |
| Species | Photobacterium damselae |
| Strain | subsp. piscicida strain L091106-03H |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Negative |
| Shape | Coccus |
| Mobility | Yes |
| Flagellar presence | Yes |
| Number of membranes | Not Available |

AI-generated image based on bacteria physiology
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Not Available |
| Optimal temperature | Not Available |
| Temperature range | mesophilic |
| Habitat | Italian aquaculture; Marine |
| Biotic relationship | Not Available |
| Host(s) | Homo sapiens, Alca torda |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Genome Summary
Photobacterium damselae subsp. piscicida strain L091106-03H
Gene Summary
Adenine Count
1223455 bp
Thymine Count
1223852 bp
Guanine Count
848705 bp
Cytosine Count
842999 bp
Genome Length
4324838 bp
Protein-coding Genes
3464 genes
Non-Coding Genes
100 genes
# of Chromosomes/Plasmids
3
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| Trna-met | Not Available | Not Available | Positive | 692798 - 692874 | Not Available |
| redox-regulated atpase ychf | BEI67_03460 | Not Available | Negative | 693206 - 694297 | 39702.7 |
| aminoacyl-trna hydrolase | BEI67_03465 | Not Available | Negative | 694359 - 694949 | 21435.9 |
| ribose-phosphate pyrophosphokinase | BEI67_03470 | Not Available | Negative | 695266 - 696204 | 34011.0 |
| 4-(cytidine 5'-diphospho)-2-c-methyl-d-erythritol kinase | BEI67_03475 | Not Available | Negative | 696246 - 697115 | 31688.9 |
| outer membrane lipoprotein lolb | BEI67_03480 | Not Available | Negative | 697130 - 697684 | 20942.9 |
| glutamyl-trna reductase | BEI67_03485 | Not Available | Positive | 698044 - 699297 | 45869.0 |
| peptide chain release factor 1 | BEI67_03490 | Not Available | Positive | 699467 - 700555 | 40644.8 |
| protein-(glutamine-n5) methyltransferase, release factor-specific | BEI67_03495 | Not Available | Positive | 700557 - 701405 | 30909.8 |
| invasion protein | BEI67_03500 | Not Available | Positive | 701418 - 701798 | 13850.7 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.

