Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Gammaproteobacteria
Order
Vibrionales
Family
Vibrionaceae
Genus
Photobacterium
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Gammaproteobacteria |
| Order | Vibrionales |
| Family | Vibrionaceae |
| Genus | Photobacterium |
| Species | Photobacterium damselae |
| Strain | subsp. piscicida strain L091106-03H |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Negative |
| Shape | Coccus |
| Mobility | Yes |
| Flagellar presence | Yes |
| Number of membranes | Not Available |

AI-generated image based on bacteria physiology
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Not Available |
| Optimal temperature | Not Available |
| Temperature range | mesophilic |
| Habitat | Italian aquaculture; Marine |
| Biotic relationship | Not Available |
| Host(s) | Homo sapiens, Alca torda |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Genome Summary
Photobacterium damselae subsp. piscicida strain L091106-03H
Gene Summary
Adenine Count
1223455 bp
Thymine Count
1223852 bp
Guanine Count
848705 bp
Cytosine Count
842999 bp
Genome Length
4324838 bp
Protein-coding Genes
3464 genes
Non-Coding Genes
100 genes
# of Chromosomes/Plasmids
3
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| thioredoxin-dependent thiol peroxidase | BEI67_03250 | Not Available | Negative | 662059 - 662529 | 17601.1 |
| hypothetical protein | BEI67_03255 | Not Available | Negative | 662751 - 663947 | 46884.2 |
| hypothetical protein | BEI67_03260 | Not Available | Negative | 663956 - 664324 | 14153.9 |
| glycine cleavage system transcriptional repressor | BEI67_03265 | Not Available | Negative | 664400 - 664888 | 18314.6 |
| 4-hydroxy-tetrahydrodipicolinate synthase | BEI67_03270 | Not Available | Positive | 665192 - 666070 | 31096.6 |
| outer membrane protein assembly factor bamc | BEI67_03275 | Not Available | Positive | 666102 - 667115 | 37399.9 |
| lipoyl synthase | BEI67_03280 | Not Available | Negative | 667240 - 668208 | 36464.1 |
| octanoyltransferase | BEI67_03285 | Not Available | Negative | 668208 - 668858 | 24225.0 |
| hypothetical protein | BEI67_03290 | Not Available | Negative | 668975 - 669247 | 10156.3 |
| d-alanyl-d-alanine carboxypeptidase | BEI67_03295 | Not Available | Negative | 669350 - 670525 | 42670.0 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.

