Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Gammaproteobacteria
Order
Vibrionales
Family
Vibrionaceae
Genus
Photobacterium
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Gammaproteobacteria |
| Order | Vibrionales |
| Family | Vibrionaceae |
| Genus | Photobacterium |
| Species | Photobacterium damselae |
| Strain | subsp. piscicida strain L091106-03H |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Negative |
| Shape | Coccus |
| Mobility | Yes |
| Flagellar presence | Yes |
| Number of membranes | Not Available |

AI-generated image based on bacteria physiology
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Not Available |
| Optimal temperature | Not Available |
| Temperature range | mesophilic |
| Habitat | Italian aquaculture; Marine |
| Biotic relationship | Not Available |
| Host(s) | Homo sapiens, Alca torda |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Genome Summary
Photobacterium damselae subsp. piscicida strain L091106-03H
Gene Summary
Adenine Count
1223455 bp
Thymine Count
1223852 bp
Guanine Count
848705 bp
Cytosine Count
842999 bp
Genome Length
4324838 bp
Protein-coding Genes
3464 genes
Non-Coding Genes
100 genes
# of Chromosomes/Plasmids
3
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| acetyl-coa carboxylase carboxyltransferase subunit alpha | BEI67_02955 | Not Available | Positive | 604838 - 605797 | 35220.5 |
| d-alanine--d-alanine ligase | BEI67_02965 | Not Available | Positive | 607409 - 608320 | 33489.3 |
| transposase | BEI67_02970 | Not Available | Positive | 608799 - 610010 | 42853.2 |
| group ii intron reverse transcriptase/maturase | BEI67_02980 | Not Available | Positive | 611194 - 611891 | 27666.6 |
| hypothetical protein | BEI67_02985 | Not Available | Negative | 611949 - 612137 | 7291.86 |
| hypothetical protein | BEI67_02990 | Not Available | Negative | 612141 - 612344 | 7392.92 |
| diguanylate cyclase | BEI67_02995 | Not Available | Negative | 612485 - 613345 | 33236.4 |
| proline--trna ligase | BEI67_03000 | Not Available | Negative | 613540 - 615258 | 63386.6 |
| trna (n6-threonylcarbamoyladenosine(37)-n6)-methyltransferase trmo | BEI67_03005 | Not Available | Negative | 615390 - 616088 | 25648.5 |
| 50s ribosomal protein l31 | BEI67_03010 | Not Available | Positive | 616211 - 616471 | 10028.8 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.

