Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Gammaproteobacteria
Order
Vibrionales
Family
Vibrionaceae
Genus
Photobacterium
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Gammaproteobacteria |
| Order | Vibrionales |
| Family | Vibrionaceae |
| Genus | Photobacterium |
| Species | Photobacterium damselae |
| Strain | subsp. piscicida strain L091106-03H |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Negative |
| Shape | Coccus |
| Mobility | Yes |
| Flagellar presence | Yes |
| Number of membranes | Not Available |

AI-generated image based on bacteria physiology
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Not Available |
| Optimal temperature | Not Available |
| Temperature range | mesophilic |
| Habitat | Italian aquaculture; Marine |
| Biotic relationship | Not Available |
| Host(s) | Homo sapiens, Alca torda |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Genome Summary
Photobacterium damselae subsp. piscicida strain L091106-03H
Gene Summary
Adenine Count
1223455 bp
Thymine Count
1223852 bp
Guanine Count
848705 bp
Cytosine Count
842999 bp
Genome Length
4324838 bp
Protein-coding Genes
3464 genes
Non-Coding Genes
100 genes
# of Chromosomes/Plasmids
3
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| 1-deoxy-d-xylulose-5-phosphate reductoisomerase | BEI67_02905 | Not Available | Positive | 591411 - 592607 | 42934.1 |
| rip metalloprotease rsep | BEI67_02910 | Not Available | Positive | 592604 - 593959 | 49258.4 |
| outer membrane protein assembly factor bama | BEI67_02915 | Not Available | Positive | 593996 - 596419 | 90157.7 |
| molecular chaperone | BEI67_02920 | Not Available | Positive | 596440 - 596949 | 18896.9 |
| udp-3-o-(3-hydroxymyristoyl)glucosamine n-acyltransferase | BEI67_02925 | Not Available | Positive | 597054 - 598082 | 36194.6 |
| 3-hydroxyacyl-[acyl-carrier-protein] dehydratase fabz | BEI67_02930 | Not Available | Positive | 598182 - 598637 | 17052.7 |
| acyl-[acyl-carrier-protein]--udp-n- acetylglucosamine o-acyltransferase | BEI67_02935 | Not Available | Positive | 598634 - 599422 | 28428.0 |
| lipid-a-disaccharide synthase | BEI67_02940 | Not Available | Positive | 599422 - 600564 | 42645.2 |
| ribonuclease hii | BEI67_02945 | Not Available | Positive | 600570 - 601175 | 22027.7 |
| dna polymerase iii subunit alpha | BEI67_02950 | Not Available | Positive | 601293 - 604772 | 130065.0 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.

