Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Gammaproteobacteria
Order
Vibrionales
Family
Vibrionaceae
Genus
Photobacterium
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Gammaproteobacteria |
| Order | Vibrionales |
| Family | Vibrionaceae |
| Genus | Photobacterium |
| Species | Photobacterium damselae |
| Strain | subsp. piscicida strain L091106-03H |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Negative |
| Shape | Coccus |
| Mobility | Yes |
| Flagellar presence | Yes |
| Number of membranes | Not Available |

AI-generated image based on bacteria physiology
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Not Available |
| Optimal temperature | Not Available |
| Temperature range | mesophilic |
| Habitat | Italian aquaculture; Marine |
| Biotic relationship | Not Available |
| Host(s) | Homo sapiens, Alca torda |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Genome Summary
Photobacterium damselae subsp. piscicida strain L091106-03H
Gene Summary
Adenine Count
1223455 bp
Thymine Count
1223852 bp
Guanine Count
848705 bp
Cytosine Count
842999 bp
Genome Length
4324838 bp
Protein-coding Genes
3464 genes
Non-Coding Genes
100 genes
# of Chromosomes/Plasmids
3
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| 2-c-methyl-d-erythritol 2,4-cyclodiphosphate synthase | BEI67_02420 | Not Available | Positive | 481920 - 482393 | 16623.1 |
| trna pseudouridine(13) synthase trud | BEI67_02425 | Not Available | Positive | 482397 - 483452 | 39594.8 |
| protein-l-isoaspartate o-methyltransferase | BEI67_02430 | Not Available | Positive | 483569 - 484198 | 23124.8 |
| hypothetical protein | BEI67_02435 | Not Available | Positive | 484211 - 485038 | 29877.6 |
| rna polymerase sigma factor rpos | BEI67_02440 | Not Available | Positive | 485092 - 486093 | 37633.4 |
| damage-inducible protein cina | BEI67_02450 | Not Available | Positive | 489058 - 489546 | 17224.4 |
| hypothetical protein | BEI67_02455 | Not Available | Positive | 489684 - 489977 | 10031.1 |
| transposase | BEI67_02460 | Not Available | Negative | 490404 - 490679 | 10458.7 |
| voltage-gated potassium channel | BEI67_02470 | Not Available | Positive | 491720 - 492910 | 43571.2 |
| alanine--trna ligase | BEI67_02475 | Not Available | Positive | 493187 - 495808 | 95119.9 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.

