Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Gammaproteobacteria
Order
Vibrionales
Family
Vibrionaceae
Genus
Photobacterium
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Gammaproteobacteria |
| Order | Vibrionales |
| Family | Vibrionaceae |
| Genus | Photobacterium |
| Species | Photobacterium damselae |
| Strain | subsp. piscicida strain L091106-03H |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Negative |
| Shape | Coccus |
| Mobility | Yes |
| Flagellar presence | Yes |
| Number of membranes | Not Available |

AI-generated image based on bacteria physiology
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Not Available |
| Optimal temperature | Not Available |
| Temperature range | mesophilic |
| Habitat | Italian aquaculture; Marine |
| Biotic relationship | Not Available |
| Host(s) | Homo sapiens, Alca torda |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Genome Summary
Photobacterium damselae subsp. piscicida strain L091106-03H
Gene Summary
Adenine Count
1223455 bp
Thymine Count
1223852 bp
Guanine Count
848705 bp
Cytosine Count
842999 bp
Genome Length
4324838 bp
Protein-coding Genes
3464 genes
Non-Coding Genes
100 genes
# of Chromosomes/Plasmids
3
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| l-aspartate oxidase | BEI67_02320 | Not Available | Negative | 459001 - 460617 | 60067.2 |
| rna polymerase sigma factor rpoe | BEI67_02325 | Not Available | Positive | 461031 - 461609 | 21879.1 |
| anti-sigma e factor | BEI67_02330 | Not Available | Positive | 461633 - 462280 | 23438.4 |
| sigma-e factor regulatory protein rseb | BEI67_02335 | Not Available | Positive | 462280 - 463260 | 36580.1 |
| transcriptional regulator | BEI67_02340 | Not Available | Positive | 463275 - 463772 | 17495.4 |
| elongation factor 4 | BEI67_02345 | Not Available | Positive | 463850 - 465646 | 66073.5 |
| signal peptidase i | BEI67_02350 | Not Available | Positive | 465795 - 466685 | 33159.2 |
| ribonuclease iii | BEI67_02355 | Not Available | Positive | 466696 - 467370 | 25032.9 |
| gtpase era | BEI67_02360 | Not Available | Positive | 467367 - 468272 | 34626.9 |
| dna repair protein reco | BEI67_02365 | Not Available | Positive | 468282 - 468992 | 26845.8 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.

