Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Gammaproteobacteria
Order
Vibrionales
Family
Vibrionaceae
Genus
Photobacterium
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Gammaproteobacteria |
| Order | Vibrionales |
| Family | Vibrionaceae |
| Genus | Photobacterium |
| Species | Photobacterium damselae |
| Strain | subsp. piscicida strain L091106-03H |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Negative |
| Shape | Coccus |
| Mobility | Yes |
| Flagellar presence | Yes |
| Number of membranes | Not Available |

AI-generated image based on bacteria physiology
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Not Available |
| Optimal temperature | Not Available |
| Temperature range | mesophilic |
| Habitat | Italian aquaculture; Marine |
| Biotic relationship | Not Available |
| Host(s) | Homo sapiens, Alca torda |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Genome Summary
Photobacterium damselae subsp. piscicida strain L091106-03H
Gene Summary
Adenine Count
1223455 bp
Thymine Count
1223852 bp
Guanine Count
848705 bp
Cytosine Count
842999 bp
Genome Length
4324838 bp
Protein-coding Genes
3464 genes
Non-Coding Genes
100 genes
# of Chromosomes/Plasmids
3
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| 16s rrna (uracil(1498)-n(3))-methyltransferase | BEI67_02160 | Not Available | Negative | 430922 - 431653 | 27004.7 |
| deoxyribonuclease i | BEI67_02165 | Not Available | Negative | 431785 - 432489 | 27155.6 |
| sprt family protein | BEI67_02170 | Not Available | Negative | 432620 - 433102 | 18669.7 |
| methionine adenosyltransferase | BEI67_02180 | Not Available | Negative | 433903 - 435084 | 43070.4 |
| transketolase | BEI67_02185 | Not Available | Positive | 435502 - 437514 | 72568.8 |
| phosphoglycerate kinase | BEI67_02195 | Not Available | Positive | 438912 - 440075 | 40745.9 |
| class ii fructose-bisphosphate aldolase | BEI67_02200 | Not Available | Positive | 440216 - 441292 | 38831.9 |
| mechanosensitive ion channel protein | BEI67_02205 | Not Available | Positive | 441642 - 442526 | 31756.6 |
| dna-binding protein | BEI67_02210 | Not Available | Negative | 442613 - 443149 | 20128.2 |
| oxidative stress defense protein | BEI67_02215 | Not Available | Positive | 443389 - 444117 | 26365.2 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.

