Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Gammaproteobacteria
Order
Vibrionales
Family
Vibrionaceae
Genus
Photobacterium
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Gammaproteobacteria |
| Order | Vibrionales |
| Family | Vibrionaceae |
| Genus | Photobacterium |
| Species | Photobacterium damselae |
| Strain | subsp. piscicida strain L091106-03H |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Negative |
| Shape | Coccus |
| Mobility | Yes |
| Flagellar presence | Yes |
| Number of membranes | Not Available |

AI-generated image based on bacteria physiology
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Not Available |
| Optimal temperature | Not Available |
| Temperature range | mesophilic |
| Habitat | Italian aquaculture; Marine |
| Biotic relationship | Not Available |
| Host(s) | Homo sapiens, Alca torda |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Genome Summary
Photobacterium damselae subsp. piscicida strain L091106-03H
Gene Summary
Adenine Count
1223455 bp
Thymine Count
1223852 bp
Guanine Count
848705 bp
Cytosine Count
842999 bp
Genome Length
4324838 bp
Protein-coding Genes
3464 genes
Non-Coding Genes
100 genes
# of Chromosomes/Plasmids
3
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| transposase | BEI67_17730 | Not Available | Positive | 3721563 - 3721838 | 10458.7 |
| transposase | BEI67_17735 | Not Available | Positive | 3722497 - 3722772 | 10481.7 |
| rna polymerase sigma factor rpos | BEI67_17745 | Not Available | Positive | 3724456 - 3725340 | 33546.9 |
| 3,4-dihydroxy-2-butanone-4-phosphate synthase | BEI67_17755 | Not Available | Positive | 3726401 - 3727054 | 23568.2 |
| bifunctional metallophosphatase/5'-nucleotidase | BEI67_17760 | Not Available | Negative | 3727198 - 3728946 | 63767.2 |
| lactoylglutathione lyase | BEI67_17765 | Not Available | Negative | 3729315 - 3729710 | 15230.0 |
| atp-dependent endonuclease | BEI67_17770 | Not Available | Positive | 3729918 - 3731618 | 65749.2 |
| hypothetical protein | BEI67_17775 | Not Available | Negative | 3731641 - 3732249 | 23424.1 |
| hypothetical protein | BEI67_17785 | Not Available | Negative | 3732788 - 3733330 | 20509.1 |
| cyclopropane-fatty-acyl-phospholipid synthase | BEI67_17790 | Not Available | Negative | 3733367 - 3734617 | 47762.9 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.

