Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Gammaproteobacteria
Order
Vibrionales
Family
Vibrionaceae
Genus
Photobacterium
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Gammaproteobacteria |
| Order | Vibrionales |
| Family | Vibrionaceae |
| Genus | Photobacterium |
| Species | Photobacterium damselae |
| Strain | subsp. piscicida strain L091106-03H |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Negative |
| Shape | Coccus |
| Mobility | Yes |
| Flagellar presence | Yes |
| Number of membranes | Not Available |

AI-generated image based on bacteria physiology
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Not Available |
| Optimal temperature | Not Available |
| Temperature range | mesophilic |
| Habitat | Italian aquaculture; Marine |
| Biotic relationship | Not Available |
| Host(s) | Homo sapiens, Alca torda |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Genome Summary
Photobacterium damselae subsp. piscicida strain L091106-03H
Gene Summary
Adenine Count
1223455 bp
Thymine Count
1223852 bp
Guanine Count
848705 bp
Cytosine Count
842999 bp
Genome Length
4324838 bp
Protein-coding Genes
3464 genes
Non-Coding Genes
100 genes
# of Chromosomes/Plasmids
3
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| rnase adaptor protein rapz | BEI67_01565 | Not Available | Negative | 311094 - 311945 | 32292.8 |
| pts iia-like nitrogen-regulatory protein ptsn | BEI67_01570 | Not Available | Negative | 311982 - 312431 | 16393.6 |
| ribosomal subunit interface protein | BEI67_01575 | Not Available | Negative | 312434 - 312721 | 10868.0 |
| rna polymerase factor sigma-54 | BEI67_01580 | Not Available | Negative | 312758 - 314221 | 54850.8 |
| lps export abc transporter atp-binding protein | BEI67_01585 | Not Available | Negative | 314293 - 315018 | 26918.6 |
| lipopolysaccharide transport periplasmic protein lpta | BEI67_01590 | Not Available | Negative | 315028 - 315534 | 18768.5 |
| lps export abc transporter periplasmic protein lptc | BEI67_01595 | Not Available | Negative | 315515 - 316078 | 21063.8 |
| 3-deoxy-d-manno-octulosonate 8-phosphate phosphatase | BEI67_01600 | Not Available | Negative | 316075 - 316632 | 20390.6 |
| d-arabinose 5-phosphate isomerase | BEI67_01605 | Not Available | Negative | 316632 - 317600 | 34392.2 |
| calcium/sodium antiporter | BEI67_01610 | Not Available | Negative | 317617 - 318582 | 33765.7 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.

