Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Gammaproteobacteria
Order
Vibrionales
Family
Vibrionaceae
Genus
Photobacterium
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Gammaproteobacteria |
| Order | Vibrionales |
| Family | Vibrionaceae |
| Genus | Photobacterium |
| Species | Photobacterium damselae |
| Strain | subsp. piscicida strain L091106-03H |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Negative |
| Shape | Coccus |
| Mobility | Yes |
| Flagellar presence | Yes |
| Number of membranes | Not Available |

AI-generated image based on bacteria physiology
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Not Available |
| Optimal temperature | Not Available |
| Temperature range | mesophilic |
| Habitat | Italian aquaculture; Marine |
| Biotic relationship | Not Available |
| Host(s) | Homo sapiens, Alca torda |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Genome Summary
Photobacterium damselae subsp. piscicida strain L091106-03H
Gene Summary
Adenine Count
1223455 bp
Thymine Count
1223852 bp
Guanine Count
848705 bp
Cytosine Count
842999 bp
Genome Length
4324838 bp
Protein-coding Genes
3464 genes
Non-Coding Genes
100 genes
# of Chromosomes/Plasmids
3
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| 3-isopropylmalate dehydratase small subunit | BEI67_15120 | Not Available | Positive | 3205129 - 3205731 | 22689.6 |
| hypothetical protein | BEI67_15125 | Not Available | Positive | 3205793 - 3206593 | 30907.6 |
| thiamine abc transporter substrate binding subunit | BEI67_15130 | Not Available | Positive | 3206845 - 3207834 | 37133.5 |
| thiamine/thiamine pyrophosphate abc transporter, permease protein | BEI67_15135 | Not Available | Positive | 3207907 - 3209502 | 58391.8 |
| thiamine abc transporter, atp-binding protein | BEI67_15140 | Not Available | Positive | 3209495 - 3210199 | 25738.4 |
| atpase | BEI67_15145 | Not Available | Negative | 3210289 - 3211665 | 51238.4 |
| rna polymerase-binding atpase | BEI67_15150 | Not Available | Positive | 3212000 - 3214954 | 111477.0 |
| hypothetical protein | BEI67_15155 | Not Available | Positive | 3215133 - 3215429 | 11339.4 |
| bifunctional trna pseudouridine(32) synthase/ribosomal large subunit pseudouridine synthase rlua | BEI67_15160 | Not Available | Positive | 3216321 - 3217001 | 26210.3 |
| molecular chaperone djla | BEI67_15165 | Not Available | Negative | 3217076 - 3217915 | 31286.7 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.

