Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Gammaproteobacteria
Order
Vibrionales
Family
Vibrionaceae
Genus
Photobacterium
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Gammaproteobacteria |
| Order | Vibrionales |
| Family | Vibrionaceae |
| Genus | Photobacterium |
| Species | Photobacterium damselae |
| Strain | subsp. piscicida strain L091106-03H |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Negative |
| Shape | Coccus |
| Mobility | Yes |
| Flagellar presence | Yes |
| Number of membranes | Not Available |

AI-generated image based on bacteria physiology
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Not Available |
| Optimal temperature | Not Available |
| Temperature range | mesophilic |
| Habitat | Italian aquaculture; Marine |
| Biotic relationship | Not Available |
| Host(s) | Homo sapiens, Alca torda |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Genome Summary
Photobacterium damselae subsp. piscicida strain L091106-03H
Gene Summary
Adenine Count
1223455 bp
Thymine Count
1223852 bp
Guanine Count
848705 bp
Cytosine Count
842999 bp
Genome Length
4324838 bp
Protein-coding Genes
3464 genes
Non-Coding Genes
100 genes
# of Chromosomes/Plasmids
3
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| thymidylate synthase | BEI67_14315 | Not Available | Negative | 3010228 - 3011079 | 32620.8 |
| prolipoprotein diacylglyceryl transferase | BEI67_14320 | Not Available | Negative | 3011278 - 3012081 | 29898.0 |
| hypothetical protein | BEI67_14325 | Not Available | Negative | 3012126 - 3012932 | 27495.8 |
| phosphoenolpyruvate--protein phosphotransferase ptsp | BEI67_14330 | Not Available | Negative | 3012952 - 3015210 | 84174.7 |
| rna pyrophosphohydrolase | BEI67_14335 | Not Available | Negative | 3015251 - 3015772 | 20841.0 |
| dna mismatch repair endonuclease muth | BEI67_14340 | Not Available | Positive | 3016398 - 3017066 | 24578.7 |
| lysr family transcriptional regulator | BEI67_14345 | Not Available | Negative | 3017063 - 3017941 | 32279.0 |
| transporter | BEI67_14350 | Not Available | Positive | 3018042 - 3018485 | 17186.4 |
| sigma-54-dependent fis family transcriptional regulator | BEI67_14355 | Not Available | Negative | 3018553 - 3019866 | 49389.0 |
| lysine--trna ligase | BEI67_14360 | Not Available | Negative | 3019980 - 3021482 | 57041.2 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.

