Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Gammaproteobacteria
Order
Vibrionales
Family
Vibrionaceae
Genus
Photobacterium
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Gammaproteobacteria |
| Order | Vibrionales |
| Family | Vibrionaceae |
| Genus | Photobacterium |
| Species | Photobacterium damselae |
| Strain | subsp. piscicida strain L091106-03H |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Negative |
| Shape | Coccus |
| Mobility | Yes |
| Flagellar presence | Yes |
| Number of membranes | Not Available |

AI-generated image based on bacteria physiology
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Not Available |
| Optimal temperature | Not Available |
| Temperature range | mesophilic |
| Habitat | Italian aquaculture; Marine |
| Biotic relationship | Not Available |
| Host(s) | Homo sapiens, Alca torda |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Genome Summary
Photobacterium damselae subsp. piscicida strain L091106-03H
Gene Summary
Adenine Count
1223455 bp
Thymine Count
1223852 bp
Guanine Count
848705 bp
Cytosine Count
842999 bp
Genome Length
4324838 bp
Protein-coding Genes
3464 genes
Non-Coding Genes
100 genes
# of Chromosomes/Plasmids
3
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| type ii secretion system protein gspl | BEI67_12935 | Not Available | Positive | 2710254 - 2711567 | 49469.2 |
| general secretion pathway protein gspm | BEI67_12940 | Not Available | Positive | 2711564 - 2712043 | 18052.7 |
| general secretion pathway protein gspn | BEI67_12945 | Not Available | Positive | 2712045 - 2712806 | 27391.8 |
| adp compounds hydrolase nude | BEI67_12950 | Not Available | Positive | 2712852 - 2713415 | 20823.9 |
| 3'(2'),5'-bisphosphate nucleotidase | BEI67_12955 | Not Available | Positive | 2713412 - 2714236 | 30334.4 |
| nad(p)(+) transhydrogenase | BEI67_12960 | Not Available | Negative | 2714334 - 2715749 | 51864.6 |
| dna-binding transcriptional regulator fabr | BEI67_12965 | Not Available | Positive | 2716058 - 2716690 | 23930.7 |
| hypothetical protein | BEI67_12970 | Not Available | Positive | 2716714 - 2717094 | 14025.5 |
| trna (uridine(54)-c5)-methyltransferase trma | BEI67_12975 | Not Available | Negative | 2717163 - 2718269 | 43045.1 |
| ligand-gated channel | BEI67_12980 | Not Available | Positive | 2718656 - 2720461 | 66815.4 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.

