Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Gammaproteobacteria
Order
Vibrionales
Family
Vibrionaceae
Genus
Photobacterium
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Gammaproteobacteria |
| Order | Vibrionales |
| Family | Vibrionaceae |
| Genus | Photobacterium |
| Species | Photobacterium damselae |
| Strain | subsp. piscicida strain L091106-03H |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Negative |
| Shape | Coccus |
| Mobility | Yes |
| Flagellar presence | Yes |
| Number of membranes | Not Available |

AI-generated image based on bacteria physiology
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Not Available |
| Optimal temperature | Not Available |
| Temperature range | mesophilic |
| Habitat | Italian aquaculture; Marine |
| Biotic relationship | Not Available |
| Host(s) | Homo sapiens, Alca torda |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Genome Summary
Photobacterium damselae subsp. piscicida strain L091106-03H
Gene Summary
Adenine Count
1223455 bp
Thymine Count
1223852 bp
Guanine Count
848705 bp
Cytosine Count
842999 bp
Genome Length
4324838 bp
Protein-coding Genes
3464 genes
Non-Coding Genes
100 genes
# of Chromosomes/Plasmids
3
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| 16s rrna (cytosine(967)-c(5))-methyltransferase | BEI67_12270 | Not Available | Negative | 2563281 - 2564558 | 47451.9 |
| methionyl-trna formyltransferase | BEI67_12275 | Not Available | Negative | 2564697 - 2565641 | 34314.3 |
| peptide deformylase | BEI67_12280 | Not Available | Negative | 2565654 - 2566166 | 19091.8 |
| dna protecting protein dpra | BEI67_12290 | Not Available | Positive | 2567496 - 2568590 | 39228.7 |
| hypothetical protein | BEI67_12295 | Not Available | Positive | 2568593 - 2569066 | 18422.9 |
| dna topoisomerase | BEI67_12300 | Not Available | Positive | 2569167 - 2569724 | 20911.2 |
| 5-(carboxyamino)imidazole ribonucleotide synthase | BEI67_12305 | Not Available | Negative | 2569792 - 2570913 | 40840.0 |
| 5-(carboxyamino)imidazole ribonucleotide mutase | BEI67_12310 | Not Available | Negative | 2570916 - 2571401 | 16898.4 |
| threonylcarbamoyl-amp synthase | BEI67_12315 | Not Available | Positive | 2571595 - 2572152 | 20239.0 |
| coproporphyrinogen iii oxidase | BEI67_12320 | Not Available | Positive | 2572156 - 2573067 | 35286.5 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.

