Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Gammaproteobacteria
Order
Vibrionales
Family
Vibrionaceae
Genus
Photobacterium
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Gammaproteobacteria |
| Order | Vibrionales |
| Family | Vibrionaceae |
| Genus | Photobacterium |
| Species | Photobacterium damselae |
| Strain | subsp. piscicida strain L091106-03H |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Negative |
| Shape | Coccus |
| Mobility | Yes |
| Flagellar presence | Yes |
| Number of membranes | Not Available |

AI-generated image based on bacteria physiology
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Not Available |
| Optimal temperature | Not Available |
| Temperature range | mesophilic |
| Habitat | Italian aquaculture; Marine |
| Biotic relationship | Not Available |
| Host(s) | Homo sapiens, Alca torda |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Genome Summary
Photobacterium damselae subsp. piscicida strain L091106-03H
Gene Summary
Adenine Count
1223455 bp
Thymine Count
1223852 bp
Guanine Count
848705 bp
Cytosine Count
842999 bp
Genome Length
4324838 bp
Protein-coding Genes
3464 genes
Non-Coding Genes
100 genes
# of Chromosomes/Plasmids
3
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| thioredoxin peroxidase | BEI67_11845 | Not Available | Negative | 2476981 - 2477523 | 20170.2 |
| lysr family transcriptional regulator | BEI67_11850 | Not Available | Positive | 2477699 - 2478601 | 33194.0 |
| aldehyde reductase | BEI67_11870 | Not Available | Negative | 2481960 - 2483108 | 41778.7 |
| hypothetical protein | BEI67_11880 | Not Available | Positive | 2484165 - 2484431 | 10503.4 |
| lysr family transcriptional regulator | BEI67_11885 | Not Available | Positive | 2484471 - 2485370 | 33512.6 |
| hypothetical protein | BEI67_11890 | Not Available | Negative | 2485481 - 2486017 | 21195.6 |
| rna pseudouridine synthase | BEI67_11895 | Not Available | Negative | 2486227 - 2487909 | 64143.7 |
| hypothetical protein | BEI67_11900 | Not Available | Negative | 2487984 - 2488670 | 25739.0 |
| transposase | BEI67_11910 | Not Available | Negative | 2489176 - 2489466 | 10918.1 |
| hypothetical protein | BEI67_11915 | Not Available | Negative | 2489563 - 2489790 | 8493.83 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.

