Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Gammaproteobacteria
Order
Vibrionales
Family
Vibrionaceae
Genus
Photobacterium
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Gammaproteobacteria |
| Order | Vibrionales |
| Family | Vibrionaceae |
| Genus | Photobacterium |
| Species | Photobacterium damselae |
| Strain | subsp. piscicida strain L091106-03H |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Negative |
| Shape | Coccus |
| Mobility | Yes |
| Flagellar presence | Yes |
| Number of membranes | Not Available |

AI-generated image based on bacteria physiology
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Not Available |
| Optimal temperature | Not Available |
| Temperature range | mesophilic |
| Habitat | Italian aquaculture; Marine |
| Biotic relationship | Not Available |
| Host(s) | Homo sapiens, Alca torda |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Genome Summary
Photobacterium damselae subsp. piscicida strain L091106-03H
Gene Summary
Adenine Count
1223455 bp
Thymine Count
1223852 bp
Guanine Count
848705 bp
Cytosine Count
842999 bp
Genome Length
4324838 bp
Protein-coding Genes
3464 genes
Non-Coding Genes
100 genes
# of Chromosomes/Plasmids
3
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| inositol monophosphatase | BEI67_10975 | Not Available | Positive | 2288902 - 2289705 | 28960.7 |
| transposase | BEI67_10980 | Not Available | Positive | 2290038 - 2290313 | 10458.7 |
| protein-export membrane protein secf | BEI67_10985 | Not Available | Negative | 2290777 - 2291724 | 34168.1 |
| protein-export membrane protein secd | BEI67_10990 | Not Available | Negative | 2291738 - 2293591 | 67201.8 |
| preprotein translocase subunit yajc | BEI67_10995 | Not Available | Negative | 2293635 - 2293973 | 12170.1 |
| trna guanosine(34) transglycosylase tgt | BEI67_11000 | Not Available | Negative | 2293997 - 2295130 | 42963.6 |
| trna preq1(34) s-adenosylmethionine ribosyltransferase-isomerase quea | BEI67_11005 | Not Available | Negative | 2295438 - 2296490 | 38950.2 |
| acetoin utilization protein acub | BEI67_11015 | Not Available | Positive | 2297875 - 2298342 | 17069.5 |
| hypothetical protein | BEI67_11020 | Not Available | Positive | 2298590 - 2299210 | 22838.3 |
| isocitrate lyase | BEI67_11025 | Not Available | Negative | 2299280 - 2300587 | 47998.5 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.

