Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Gammaproteobacteria
Order
Vibrionales
Family
Vibrionaceae
Genus
Photobacterium
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Gammaproteobacteria |
| Order | Vibrionales |
| Family | Vibrionaceae |
| Genus | Photobacterium |
| Species | Photobacterium damselae |
| Strain | subsp. piscicida strain L091106-03H |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Negative |
| Shape | Coccus |
| Mobility | Yes |
| Flagellar presence | Yes |
| Number of membranes | Not Available |

AI-generated image based on bacteria physiology
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Not Available |
| Optimal temperature | Not Available |
| Temperature range | mesophilic |
| Habitat | Italian aquaculture; Marine |
| Biotic relationship | Not Available |
| Host(s) | Homo sapiens, Alca torda |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Genome Summary
Photobacterium damselae subsp. piscicida strain L091106-03H
Gene Summary
Adenine Count
1223455 bp
Thymine Count
1223852 bp
Guanine Count
848705 bp
Cytosine Count
842999 bp
Genome Length
4324838 bp
Protein-coding Genes
3464 genes
Non-Coding Genes
100 genes
# of Chromosomes/Plasmids
3
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| ribosome biogenesis gtpase der | BEI67_10870 | Not Available | Negative | 2269330 - 2270829 | 56047.2 |
| outer membrane protein assembly factor bamb | BEI67_10875 | Not Available | Negative | 2271043 - 2272206 | 41222.7 |
| hypothetical protein | BEI67_10880 | Not Available | Negative | 2272218 - 2272832 | 22302.3 |
| histidine--trna ligase | BEI67_10885 | Not Available | Negative | 2272846 - 2274114 | 47379.0 |
| 4-hydroxy-3-methylbut-2-en-1-yl diphosphate synthase | BEI67_10890 | Not Available | Negative | 2274211 - 2275332 | 41035.4 |
| xre family transcriptional regulator | BEI67_10895 | Not Available | Negative | 2275346 - 2276329 | 35699.5 |
| bifunctional trna (adenosine(37)-c2)-methyltransferase trmg/ribosomal rna large subunit methyltransferase rlmn | BEI67_10905 | Not Available | Negative | 2277131 - 2278249 | 42037.9 |
| hypothetical protein | BEI67_10910 | Not Available | Positive | 2278303 - 2278557 | 9938.38 |
| nucleoside-diphosphate kinase | BEI67_10915 | Not Available | Negative | 2278644 - 2279069 | 15730.8 |
| aminopeptidase pepb | BEI67_10920 | Not Available | Negative | 2279171 - 2280448 | 45526.7 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.

