Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Gammaproteobacteria
Order
Vibrionales
Family
Vibrionaceae
Genus
Photobacterium
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Gammaproteobacteria |
| Order | Vibrionales |
| Family | Vibrionaceae |
| Genus | Photobacterium |
| Species | Photobacterium damselae |
| Strain | subsp. piscicida strain L091106-03H |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Negative |
| Shape | Coccus |
| Mobility | Yes |
| Flagellar presence | Yes |
| Number of membranes | Not Available |

AI-generated image based on bacteria physiology
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Not Available |
| Optimal temperature | Not Available |
| Temperature range | mesophilic |
| Habitat | Italian aquaculture; Marine |
| Biotic relationship | Not Available |
| Host(s) | Homo sapiens, Alca torda |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Genome Summary
Photobacterium damselae subsp. piscicida strain L091106-03H
Gene Summary
Adenine Count
1223455 bp
Thymine Count
1223852 bp
Guanine Count
848705 bp
Cytosine Count
842999 bp
Genome Length
4324838 bp
Protein-coding Genes
3464 genes
Non-Coding Genes
100 genes
# of Chromosomes/Plasmids
3
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| fimbrial protein | BEI67_00965 | Not Available | Negative | 192901 - 194577 | 60726.3 |
| pilus assembly protein pils | BEI67_00980 | Not Available | Negative | 195751 - 196392 | 24239.4 |
| pilus assembly protein pilm | BEI67_00985 | Not Available | Negative | 196389 - 197387 | 37109.8 |
| penicillin-sensitive transpeptidase | BEI67_00990 | Not Available | Positive | 197538 - 200111 | 94385.7 |
| dna-binding transcriptional regulator oxyr | BEI67_00995 | Not Available | Negative | 200199 - 201098 | 33258.6 |
| hypothetical protein | BEI67_01005 | Not Available | Negative | 202620 - 202802 | 6890.07 |
| transcriptional regulator crp | BEI67_01010 | Not Available | Negative | 203027 - 203659 | 23606.9 |
| osmotically inducible protein osmc | BEI67_01015 | Not Available | Positive | 204046 - 204450 | 14091.0 |
| phosphoribulokinase | BEI67_01020 | Not Available | Negative | 204500 - 205369 | 32743.4 |
| hypothetical protein | BEI67_01025 | Not Available | Negative | 205503 - 205718 | 8201.75 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.

