Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Gammaproteobacteria
Order
Vibrionales
Family
Vibrionaceae
Genus
Photobacterium
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Gammaproteobacteria |
| Order | Vibrionales |
| Family | Vibrionaceae |
| Genus | Photobacterium |
| Species | Photobacterium damselae |
| Strain | subsp. piscicida strain L091106-03H |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Negative |
| Shape | Coccus |
| Mobility | Yes |
| Flagellar presence | Yes |
| Number of membranes | Not Available |

AI-generated image based on bacteria physiology
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Not Available |
| Optimal temperature | Not Available |
| Temperature range | mesophilic |
| Habitat | Italian aquaculture; Marine |
| Biotic relationship | Not Available |
| Host(s) | Homo sapiens, Alca torda |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Genome Summary
Photobacterium damselae subsp. piscicida strain L091106-03H
Gene Summary
Adenine Count
1223455 bp
Thymine Count
1223852 bp
Guanine Count
848705 bp
Cytosine Count
842999 bp
Genome Length
4324838 bp
Protein-coding Genes
3464 genes
Non-Coding Genes
100 genes
# of Chromosomes/Plasmids
3
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| lipid a biosynthesis (kdo)2-(lauroyl)-lipid iva acyltransferase | BEI67_00680 | Not Available | Negative | 131105 - 132055 | 36471.0 |
| peptidase m23 | BEI67_00690 | Not Available | Negative | 132959 - 134146 | 43713.7 |
| phosphoglycerate mutase (2,3-diphosphoglycerate-independent) | BEI67_00695 | Not Available | Negative | 134164 - 135705 | 55696.9 |
| rhodanese-like domain-containing protein | BEI67_00700 | Not Available | Positive | 136115 - 136555 | 16121.6 |
| protein-export chaperone secb | BEI67_00705 | Not Available | Positive | 136647 - 137114 | 17193.2 |
| glycerol-3-phosphate dehydrogenase | BEI67_00710 | Not Available | Positive | 137138 - 138154 | 35928.2 |
| serine o-acetyltransferase | BEI67_00715 | Not Available | Positive | 138287 - 139108 | 29275.3 |
| trna (uridine(34)/cytosine(34)/5- carboxymethylaminomethyluridine(34)-2'-o)- methyltransferase trml | BEI67_00720 | Not Available | Negative | 139167 - 139631 | 17438.9 |
| dna-binding response regulator | BEI67_00730 | Not Available | Negative | 141086 - 141772 | 25926.5 |
| 6-phosphofructokinase | BEI67_00740 | Not Available | Positive | 143045 - 144007 | 34690.1 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.

