Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Gammaproteobacteria
Order
Vibrionales
Family
Vibrionaceae
Genus
Photobacterium
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Gammaproteobacteria |
| Order | Vibrionales |
| Family | Vibrionaceae |
| Genus | Photobacterium |
| Species | Photobacterium damselae |
| Strain | subsp. piscicida strain L091106-03H |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Negative |
| Shape | Coccus |
| Mobility | Yes |
| Flagellar presence | Yes |
| Number of membranes | Not Available |

AI-generated image based on bacteria physiology
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Not Available |
| Optimal temperature | Not Available |
| Temperature range | mesophilic |
| Habitat | Italian aquaculture; Marine |
| Biotic relationship | Not Available |
| Host(s) | Homo sapiens, Alca torda |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Genome Summary
Photobacterium damselae subsp. piscicida strain L091106-03H
Gene Summary
Adenine Count
1223455 bp
Thymine Count
1223852 bp
Guanine Count
848705 bp
Cytosine Count
842999 bp
Genome Length
4324838 bp
Protein-coding Genes
3464 genes
Non-Coding Genes
100 genes
# of Chromosomes/Plasmids
3
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| 50s ribosomal protein l28 | BEI67_00580 | Not Available | Positive | 113332 - 113568 | 9034.13 |
| 50s ribosomal protein l33 | BEI67_00585 | Not Available | Positive | 113583 - 113750 | 6377.89 |
| group ii intron reverse transcriptase/maturase | BEI67_00590 | Not Available | Positive | 114459 - 115200 | 29255.6 |
| hypothetical protein | BEI67_00595 | Not Available | Positive | 115310 - 115789 | 18071.2 |
| dna-formamidopyrimidine glycosylase | BEI67_00600 | Not Available | Positive | 115814 - 116623 | 29579.9 |
| protein capi | BEI67_00605 | Not Available | Positive | 116759 - 117763 | 37456.4 |
| pantetheine-phosphate adenylyltransferase | BEI67_00610 | Not Available | Negative | 117826 - 118308 | 17833.5 |
| glycosyl transferase | BEI67_00615 | Not Available | Negative | 118328 - 119359 | 38208.1 |
| 3-deoxy-d-manno-octulosonic acid kinase | BEI67_00620 | Not Available | Positive | 119451 - 120155 | 27130.6 |
| 3-deoxy-d-manno-octulosonic acid transferase | BEI67_00625 | Not Available | Negative | 120152 - 121423 | 47083.4 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.

