Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Gammaproteobacteria
Order
Vibrionales
Family
Vibrionaceae
Genus
Photobacterium
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Gammaproteobacteria |
| Order | Vibrionales |
| Family | Vibrionaceae |
| Genus | Photobacterium |
| Species | Photobacterium damselae |
| Strain | subsp. piscicida strain L091106-03H |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Negative |
| Shape | Coccus |
| Mobility | Yes |
| Flagellar presence | Yes |
| Number of membranes | Not Available |

AI-generated image based on bacteria physiology
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Not Available |
| Optimal temperature | Not Available |
| Temperature range | mesophilic |
| Habitat | Italian aquaculture; Marine |
| Biotic relationship | Not Available |
| Host(s) | Homo sapiens, Alca torda |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Genome Summary
Photobacterium damselae subsp. piscicida strain L091106-03H
Gene Summary
Adenine Count
1223455 bp
Thymine Count
1223852 bp
Guanine Count
848705 bp
Cytosine Count
842999 bp
Genome Length
4324838 bp
Protein-coding Genes
3464 genes
Non-Coding Genes
100 genes
# of Chromosomes/Plasmids
3
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| hypothetical protein | BEI67_00525 | Not Available | Negative | 104249 - 104707 | 17022.0 |
| hypothetical protein | BEI67_00530 | Not Available | Negative | 104745 - 105467 | 26951.5 |
| hypothetical protein | BEI67_00535 | Not Available | Negative | 105557 - 105994 | 16664.6 |
| transposase | BEI67_00540 | Not Available | Negative | 106003 - 106392 | 15875.3 |
| yicc family protein | BEI67_00545 | Not Available | Negative | 107070 - 107933 | 32736.3 |
| ribonuclease ph | BEI67_00550 | Not Available | Positive | 108171 - 108887 | 25766.1 |
| orotate phosphoribosyltransferase | BEI67_00555 | Not Available | Positive | 109019 - 109660 | 23276.8 |
| nucleoid occlusion factor slma | BEI67_00560 | Not Available | Negative | 109736 - 110326 | 22763.6 |
| deoxyuridine 5'-triphosphate nucleotidohydrolase | BEI67_00565 | Not Available | Negative | 110529 - 110984 | 16072.2 |
| phosphopantothenoylcysteine decarboxylase | BEI67_00570 | Not Available | Negative | 110995 - 112218 | 43345.5 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.

