Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Gammaproteobacteria
Order
Vibrionales
Family
Vibrionaceae
Genus
Photobacterium
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Gammaproteobacteria |
| Order | Vibrionales |
| Family | Vibrionaceae |
| Genus | Photobacterium |
| Species | Photobacterium damselae |
| Strain | subsp. piscicida strain L091106-03H |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Not Available |
| Shape | Coccus |
| Mobility | Not Available |
| Flagellar presence | Not Available |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Not Available |
| Optimal temperature | Not Available |
| Temperature range | mesophilic |
| Habitat | Italian aquaculture; Marine |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Genome Summary
Photobacterium damselae subsp. piscicida strain L091106-03H
Gene Summary
Adenine Count
1223455 bp
Thymine Count
1223852 bp
Guanine Count
848705 bp
Cytosine Count
842999 bp
Genome Length
4324838 bp
Protein-coding Genes
3464 genes
Non-Coding Genes
100 genes
# of Chromosomes/Plasmids
3
Genes
| Name | Locus Tag | UniProt | Strand | Coordinates | Molecular Weight |
|---|---|---|---|---|---|
| 5s ribosomal rna | Not Available | Not Available | + | 295 - 410 | Not Available |
| Trna-asp | Not Available | Not Available | + | 453 - 529 | Not Available |
| Trna-trp | Not Available | Not Available | + | 565 - 641 | Not Available |
| transcriptional regulator ilvy | BEI67_00030 | Not Available | - | 1762 - 2640 | 32397.2 |
| ketol-acid reductoisomerase | BEI67_00035 | Not Available | + | 2768 - 4255 | 55086.8 |
| cytoplasmic protein | BEI67_00040 | Not Available | - | 4333 - 4593 | 9943.0 |
| transporter | BEI67_00045 | Not Available | - | 4727 - 7843 | 112304.0 |
| efflux transporter periplasmic adaptor subunit | BEI67_00050 | Not Available | - | 7856 - 8962 | 40674.0 |
| tetr family transcriptional regulator | BEI67_00055 | Not Available | - | 8986 - 9552 | 21505.1 |
| atp-dependent dna helicase rep | BEI67_00060 | Not Available | + | 9743 - 11761 | 77571.4 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.