Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Alphaproteobacteria
Order
Hyphomicrobiales
Family
Rhizobiaceae
Genus
Agrobacterium
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Alphaproteobacteria |
| Order | Hyphomicrobiales |
| Family | Rhizobiaceae |
| Genus | Agrobacterium |
| Species | Agrobacterium deltae |
| Strain | nse strain T3F4 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Negative |
| Shape | Rod |
| Mobility | Not Available |
| Flagellar presence | Yes |
| Number of membranes | Not Available |
Image source: Wikipedia/Wikimedia
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Not Available |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | Not Available |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
1139291 bp
Thymine Count
1127910 bp
Guanine Count
1679402 bp
Cytosine Count
1694066 bp
Genome Length
5640671 bp
Protein-coding Genes
5124 genes
Non-Coding Genes
88 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| 3-carboxy-cis,cis-muconate cycloisomerase | BCY90_24650 | Not Available | Positive | 3057484 - 3058545 | 37492.9 |
| abc transporter permease | BCY90_24655 | Not Available | Positive | 3058916 - 3059584 | 24097.3 |
| amino acid abc transporter permease | BCY90_24660 | Not Available | Positive | 3059595 - 3060245 | 23070.7 |
| abc transporter substrate-binding protein | BCY90_24665 | Not Available | Positive | 3060287 - 3061126 | 29682.5 |
| abc transporter substrate-binding protein | BCY90_24670 | Not Available | Positive | 3061162 - 3062001 | 29780.6 |
| glutamine abc transporter atp-binding protein | BCY90_24675 | Not Available | Positive | 3062032 - 3062790 | 27931.0 |
| shikimate dehydrogenase | BCY90_24680 | Not Available | Positive | 3062863 - 3063732 | 31228.8 |
| type ii 3-dehydroquinate dehydratase | BCY90_24685 | Not Available | Positive | 3063729 - 3064172 | 16239.2 |
| tetr family transcriptional regulator | BCY90_24690 | Not Available | Negative | 3064147 - 3064839 | 26266.4 |
| 3-keto-5-aminohexanoate cleavage protein | BCY90_24695 | Not Available | Positive | 3064959 - 3066860 | 69856.5 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.

